Strain Fitness in Variovorax sp. SCN45 around GFF6700

Experiment: Community=Locust bean gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=1
7,631	+		GFF6699	0.63	+0.1
7,631	+		GFF6699	0.63	-0.6
7,632	-		GFF6699	0.63	+0.2
7,632	-		GFF6699	0.63	-0.4
7,632	-		GFF6699	0.63	+0.8
7,632	-		GFF6699	0.63	-0.5
7,756	-		GFF6699	0.73	-0.4
7,756	-		GFF6699	0.73	-2.0
7,971	+				-2.0
7,971	+				-0.1
7,971	+				-0.0
7,971	+				+0.5
7,971	+				+0.2
7,971	+				+0.2
7,971	+				-0.3
7,971	+				+0.9
7,972	-				+0.3
7,972	-				-1.2
7,972	-				+0.1
7,972	-				-0.3
7,972	-				-1.2
7,972	-				-0.3
7,972	-				-1.1
7,972	-				+0.1
7,972	-				+0.3
7,972	-				-1.3
7,972	-				-0.4
7,974	+				-0.2
7,974	+				-0.7
7,975	-				-1.1
7,975	-				+1.5
8,046	+				+0.5
8,046	+				-2.3
8,046	+				-0.3
8,046	+				+0.3
8,047	-				+0.1
8,258	+				-1.0
8,258	+				-1.0
8,259	-				+0.9
8,259	-				+0.4
8,259	-				-1.1
8,537	+		GFF6700	0.16	+0.5
8,537	+		GFF6700	0.16	+0.5
8,537	+		GFF6700	0.16	+0.5
8,538	-		GFF6700	0.16	+1.5
9,398	+		GFF6700	0.66	-0.1
9,398	+		GFF6700	0.66	-0.5
9,398	+		GFF6700	0.66	+0.5
9,398	+		GFF6700	0.66	+0.5
9,399	-		GFF6700	0.66	+2.5
9,399	-		GFF6700	0.66	-0.1
9,674	+		GFF6700	0.82	+0.5
9,674	+		GFF6700	0.82	+1.5
9,675	-		GFF6700	0.82	-0.1
9,750	-		GFF6700	0.86	+1.5
9,985	-				-0.9
10,066	+				+2.1
10,066	+				-0.3
10,067	-				-0.0
10,067	-				+0.5
10,123	+		GFF6701	0.15	+0.5
10,351	+		GFF6701	0.38	+0.7
10,352	-		GFF6701	0.38	+0.6
10,352	-		GFF6701	0.38	-0.7
10,955	+				-0.8
10,956	-				-0.4