Strain Fitness in Variovorax sp. SCN45 around GFF6353

Experiment: Community=Locust bean gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=1
17,183	-		GFF6352	0.76	-0.2
17,227	-		GFF6352	0.77	-1.3
17,452	+		GFF6352	0.83	-0.0
17,626	+		GFF6352	0.88	-1.0
17,626	+		GFF6352	0.88	+0.8
17,626	+		GFF6352	0.88	-0.5
17,626	+		GFF6352	0.88	-0.0
17,627	-		GFF6352	0.88	-0.3
18,030	-				+0.1
18,396	+		GFF6353	0.25	+0.7
18,876	+		GFF6353	0.60	+1.2
18,877	-		GFF6353	0.60	+0.8
18,877	-		GFF6353	0.60	-0.3
19,426	+				-0.5
19,427	-				+0.2
19,557	-				+0.5
19,562	+				+2.1
19,905	-		GFF6354	0.34	-1.2
20,039	+		GFF6354	0.44	-1.2
20,214	-		GFF6354	0.57	-0.5
20,214	-		GFF6354	0.57	-0.1
20,214	-		GFF6354	0.57	-0.2