Strain Fitness in Variovorax sp. SCN45 around GFF6328
Experiment: Community=Locust bean gum; Passage=1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Community=Locust bean gum; Passage=1 |
---|---|---|---|---|---|
remove | |||||
121,281 | + | -0.8 | |||
121,282 | - | -0.4 | |||
121,282 | - | -1.5 | |||
121,282 | - | -0.6 | |||
121,282 | - | -0.8 | |||
121,282 | - | +0.9 | |||
121,282 | - | +0.2 | |||
121,457 | - | GFF6328 | 0.33 | -1.8 |
Or see this region's nucleotide sequence