Strain Fitness in Variovorax sp. SCN45 around GFF6200

Experiment: Community=Locust bean gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=1
105,287	-		GFF6198	0.45	+0.0
105,371	-		GFF6198	0.53	-0.1
105,469	+		GFF6198	0.62	+0.2
105,470	-		GFF6198	0.62	+0.1
105,470	-		GFF6198	0.62	+0.6
105,470	-		GFF6198	0.62	-0.1
105,580	+		GFF6198	0.72	-2.4
105,581	-		GFF6198	0.72	-0.1
105,581	-		GFF6198	0.72	-1.1
105,670	+		GFF6198	0.80	-0.6
105,670	+		GFF6198	0.80	-0.2
105,671	-		GFF6198	0.80	-1.7
105,671	-		GFF6198	0.80	+0.6
105,736	+		GFF6198	0.86	+0.3
105,736	+		GFF6198	0.86	-0.6
105,737	-		GFF6198	0.86	-1.1
105,737	-		GFF6198	0.86	-0.0
105,767	-		GFF6198	0.89	-1.7
105,767	-		GFF6198	0.89	-0.9
105,955	+				-0.1
106,041	+		GFF6199	0.18	+0.1
106,180	+				+0.1
106,181	-				+1.0
106,422	-		GFF6200	0.13	+0.8
106,422	-		GFF6200	0.13	+0.4
106,454	+		GFF6200	0.15	+0.3
106,631	+		GFF6200	0.27	+1.4
106,631	+		GFF6200	0.27	-0.5
106,787	+		GFF6200	0.38	-0.1
106,788	-		GFF6200	0.38	+0.3
106,811	+		GFF6200	0.39	+0.7
106,811	+		GFF6200	0.39	+0.4
106,811	+		GFF6200	0.39	+0.4
106,811	+		GFF6200	0.39	-1.0
106,812	-		GFF6200	0.39	-0.5
106,814	+		GFF6200	0.39	-0.5
106,814	+		GFF6200	0.39	-1.1
106,814	+		GFF6200	0.39	+1.0
106,814	+		GFF6200	0.39	+0.8
106,815	-		GFF6200	0.39	-0.2
106,815	-		GFF6200	0.39	+0.1
106,815	-		GFF6200	0.39	+0.4
106,815	-		GFF6200	0.39	+0.6
107,423	+		GFF6200	0.81	+0.9
107,423	+		GFF6200	0.81	+1.1
107,423	+		GFF6200	0.81	-3.1
107,423	+		GFF6200	0.81	-0.3
107,724	+				+0.0
107,866	-		GFF6201	0.12	+1.1
107,892	+		GFF6201	0.15	+0.5
107,892	+		GFF6201	0.15	+0.0
107,892	+		GFF6201	0.15	-0.2
107,892	+		GFF6201	0.15	+0.3
107,893	-		GFF6201	0.15	-0.4
107,893	-		GFF6201	0.15	-1.2
107,959	+		GFF6201	0.23	+1.2
107,960	-		GFF6201	0.23	+1.4
108,079	-		GFF6201	0.38	-2.3
108,252	+		GFF6201	0.59	-0.1
108,252	+		GFF6201	0.59	+0.9
108,252	+		GFF6201	0.59	-0.4
108,252	+		GFF6201	0.59	-0.3
108,253	-		GFF6201	0.59	-0.3
108,253	-		GFF6201	0.59	+1.4
108,253	-		GFF6201	0.59	+0.4