Strain Fitness in Variovorax sp. SCN45 around GFF5937

Experiment: Community=Locust bean gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=1
156,812	+		GFF5936	0.87	-0.8
156,854	+		GFF5936	0.89	-0.9
156,854	+		GFF5936	0.89	-0.6
156,854	+		GFF5936	0.89	+0.9
156,981	-				+1.3
157,056	-				+0.7
157,107	-				-0.1
157,107	-				-0.9
157,631	+		GFF5937	0.42	-1.0
157,841	+		GFF5937	0.63	-1.3
157,842	-		GFF5937	0.63	+0.2
158,527	+		GFF5938	0.16	-0.4
158,593	+		GFF5938	0.20	+0.4
158,593	+		GFF5938	0.20	-0.8
158,594	-		GFF5938	0.20	-0.1
158,594	-		GFF5938	0.20	+0.2
158,840	-		GFF5938	0.33	-0.8
158,926	+		GFF5938	0.37	-0.3