Strain Fitness in Variovorax sp. SCN45 around GFF5814

Experiment: Community=Locust bean gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=1
192,637	+		GFF5813	0.72	+0.4
192,637	+		GFF5813	0.72	-0.3
192,638	-		GFF5813	0.72	-0.2
192,977	+				+0.6
192,977	+				-0.2
193,712	+		GFF5814	0.61	+1.1
193,943	+		GFF5814	0.85	-1.0
193,943	+		GFF5814	0.85	-0.9
193,944	-		GFF5814	0.85	+0.4
193,944	-		GFF5814	0.85	-0.8
194,129	-				-0.2
194,129	-				-0.2
194,286	+				-0.4
194,287	-				-1.0
194,287	-				-0.2
194,287	-				-1.9
194,287	-				-0.9
194,287	-				-1.3
194,379	+		GFF5815	0.16	-0.7
194,859	+		GFF5815	0.55	+0.6
194,860	-		GFF5815	0.55	+0.8