Strain Fitness in Variovorax sp. SCN45 around GFF5700

Experiment: Community=Locust bean gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=1
73,734	-		GFF5698	0.87	+1.6
73,734	-		GFF5698	0.87	-0.8
73,773	-		GFF5698	0.89	+1.2
73,773	-		GFF5698	0.89	-0.3
73,773	-		GFF5698	0.89	+0.3
73,967	+				-1.2
73,968	-				-0.2
73,968	-				+0.1
73,994	+				-1.0
73,994	+				-0.8
74,250	+		GFF5699	0.29	-0.2
74,250	+		GFF5699	0.29	-0.2
74,251	-		GFF5699	0.30	-0.0
74,327	+		GFF5699	0.41	-0.0
74,327	+		GFF5699	0.41	+1.2
74,327	+		GFF5699	0.41	-0.4
74,328	-		GFF5699	0.41	+0.3
74,328	-		GFF5699	0.41	-0.5
74,930	+		GFF5700	0.32	-0.9
75,053	+		GFF5700	0.50	-0.7
75,576	+		GFF5701	0.17	+0.8
75,576	+		GFF5701	0.17	+0.7
75,833	-		GFF5701	0.75	+0.6
75,938	+				+2.2
75,938	+				+0.3
75,938	+				+0.2
75,938	+				-1.1
75,938	+				-0.1
75,938	+				+0.3
75,939	-				+1.6
75,939	-				+0.6
75,939	-				-0.5
75,939	-				-0.1
75,939	-				-0.7
75,939	-				-0.7