Strain Fitness in Variovorax sp. SCN45 around GFF5614

Experiment: Community=Locust bean gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=1
235,420	+		GFF5612	0.86	+0.2
235,421	-		GFF5612	0.86	-1.3
235,421	-		GFF5612	0.86	-0.5
235,421	-		GFF5612	0.86	-0.5
235,426	+		GFF5612	0.86	-0.2
235,570	+				-0.1
235,571	-				-0.2
235,571	-				-1.2
235,600	+				+0.1
235,600	+				-0.3
235,600	+				-0.0
235,601	-				+0.9
235,601	-				+0.3
235,601	-				+0.1
235,653	+				-0.2
236,331	+				-0.3
236,331	+				-0.5
236,407	+				-0.0
236,407	+				-1.4
237,431	-		GFF5614	0.88	-0.1
237,431	-		GFF5614	0.88	+0.5
237,548	+				-1.1
237,548	+				-0.2
237,548	+				-0.9
237,569	-				-0.5
238,005	-		GFF5615	0.34	+0.5
238,142	+		GFF5615	0.46	-0.3
238,395	-		GFF5615	0.68	+1.4
238,568	+		GFF5615	0.83	-0.7
238,569	-		GFF5615	0.83	-0.7