Strain Fitness in Variovorax sp. SCN45 around GFF4710

Experiment: Community=Locust bean gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=1
73,192	+		GFF4709	0.12	-0.2
73,192	+		GFF4709	0.12	+0.2
73,192	+		GFF4709	0.12	-1.1
73,193	-		GFF4709	0.12	+0.0
73,193	-		GFF4709	0.12	+1.3
73,193	-		GFF4709	0.12	-0.4
73,193	-		GFF4709	0.12	-0.1
73,193	-		GFF4709	0.12	-0.5
73,265	+		GFF4709	0.21	+0.7
73,265	+		GFF4709	0.21	+0.2
73,266	-		GFF4709	0.22	+0.1
73,266	-		GFF4709	0.22	-0.7
73,266	-		GFF4709	0.22	+0.9
73,388	+		GFF4709	0.37	-0.3
73,388	+		GFF4709	0.37	-0.6
73,388	+		GFF4709	0.37	-0.0
73,389	+		GFF4709	0.37	+0.1
73,389	-		GFF4709	0.37	-1.2
73,483	+		GFF4709	0.49	+0.4
73,483	+		GFF4709	0.49	+0.1
73,483	+		GFF4709	0.49	+0.3
73,483	+		GFF4709	0.49	+0.3
73,484	-		GFF4709	0.49	-0.4
73,618	+		GFF4709	0.65	-1.5
73,618	+		GFF4709	0.65	+0.8
73,619	-		GFF4709	0.65	-0.7
73,870	+				-0.6
73,870	+				-0.1
73,870	+				-0.3
73,870	+				-0.9
73,870	+				-0.3
73,870	+				-1.7
73,870	+				+0.8
73,870	+				-0.2
73,870	+				+0.3
73,870	+				-0.2
73,870	+				+0.2
73,870	+				-0.4
73,871	-				-1.0
73,871	-				+1.3
73,871	-				+0.2
73,871	-				+0.8
73,871	-				+0.1
73,871	-				-0.2
73,871	-				+1.3
73,871	-				-0.7
73,871	-				-0.5
73,871	-				-1.0
73,871	-				-0.3
73,871	-				-0.3
73,871	-				-0.6
74,047	+		GFF4710	0.30	+0.9
74,048	-		GFF4710	0.30	-0.5
74,564	+		GFF4711	0.41	+0.6
74,564	+		GFF4711	0.41	-0.3
74,564	+		GFF4711	0.41	+1.0
74,564	+		GFF4711	0.41	-0.1
74,564	+		GFF4711	0.41	+0.2
74,564	+		GFF4711	0.41	-0.0
74,565	-		GFF4711	0.41	-0.3
74,565	-		GFF4711	0.41	+0.2
74,565	-		GFF4711	0.41	-0.6
74,565	-		GFF4711	0.41	-0.6
74,565	-		GFF4711	0.41	+0.1
74,565	-		GFF4711	0.41	-0.7
74,565	-		GFF4711	0.41	+1.2
74,565	-		GFF4711	0.41	-0.8
74,565	-		GFF4711	0.41	-0.3
74,565	-		GFF4711	0.41	+0.1
74,565	-		GFF4711	0.41	-0.6
74,565	-		GFF4711	0.41	+0.3
74,565	-		GFF4711	0.41	-0.8
74,565	-		GFF4711	0.41	-0.5
74,565	-		GFF4711	0.41	+0.1
74,940	+				-1.1
74,940	+				-0.8
74,940	+				+0.7
74,940	+				-1.0
74,940	+				-0.3
74,940	+				-0.2
74,940	+				-1.0
74,940	+				-1.2
74,940	+				+0.1
74,940	+				+1.3
74,940	+				-0.7
74,941	-				-0.3
74,941	-				+0.0
74,941	-				-0.0
74,941	-				+1.3
74,941	-				-0.0
74,941	-				+0.6
74,941	-				-0.2
74,941	-				+0.5
74,941	-				-0.3
74,941	-				+0.5
74,941	-				-2.0
74,941	-				-0.1
74,941	-				-0.2
74,941	-				-0.2
74,941	-				+0.5
74,941	-				-0.6
74,943	+				-0.6
74,943	+				-0.6
74,943	+				-1.0
74,943	+				-0.2
74,943	+				-0.0
74,943	+				+0.6
74,943	+				-0.0
74,944	-				-1.0
74,944	-				-0.4
74,944	-				-0.1
74,944	-				+1.3
74,944	-				+0.3
74,944	-				-0.7
74,944	-				-0.8
74,944	-				-0.7
75,266	+				+1.3
75,266	+				-0.5
75,266	+				-0.4
75,266	+				+0.1
75,267	-				-0.9
75,267	-				-0.7
75,313	+				+0.6
75,313	+				-0.5
75,313	+				-1.8
75,313	+				-1.1
75,313	+				-1.0
75,313	+				+0.3
75,313	+				+0.1
75,313	+				-0.6
75,313	+				-1.2
75,314	-				-0.9
75,314	-				-0.9
75,314	-				-1.3
75,314	-				-1.8
75,314	-				-0.7
75,314	-				+0.1
75,314	-				+2.7
75,314	-				+0.2
75,314	-				+1.5
75,314	-				+0.2
75,315	+				-0.3
75,315	+				-2.0
75,315	+				-1.0
75,315	+				-1.0
75,315	+				-0.6
75,344	+				-1.3
75,344	+				+0.7