Strain Fitness in Variovorax sp. SCN45 around GFF4285

Experiment: Community=Locust bean gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=1
204,603	+		GFF4284	0.56	-0.9
204,604	-		GFF4284	0.56	+0.2
204,660	+		GFF4284	0.59	+2.4
204,661	-		GFF4284	0.59	-1.0
204,681	+		GFF4284	0.61	+1.3
204,810	+		GFF4284	0.69	+0.0
204,810	+		GFF4284	0.69	+0.4
204,810	+		GFF4284	0.69	-0.8
204,811	-		GFF4284	0.69	+0.3
204,811	-		GFF4284	0.69	+3.6
204,811	-		GFF4284	0.69	-0.4
205,017	+		GFF4284	0.82	-0.9
205,017	+		GFF4284	0.82	-1.5
205,206	+				-0.1
205,294	+				-0.2
205,295	-				-0.6
205,811	+		GFF4285	0.54	+0.6
205,811	+		GFF4285	0.54	-0.4
205,812	-		GFF4285	0.54	-1.1
205,926	-		GFF4285	0.66	-0.2
206,364	+				-0.1
206,737	+		GFF4286	0.46	-2.5
206,833	+		GFF4286	0.56	-1.2