Strain Fitness in Variovorax sp. SCN45 around GFF3445

Experiment: Community=Locust bean gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=1
267,577	+		GFF3444	0.23	+0.3
267,577	+		GFF3444	0.23	-0.4
267,578	-		GFF3444	0.23	-0.8
267,578	-		GFF3444	0.23	-0.5
267,856	+		GFF3444	0.51	+0.0
267,856	+		GFF3444	0.51	+0.1
267,856	+		GFF3444	0.51	-0.2
267,857	-		GFF3444	0.51	-0.0
267,857	-		GFF3444	0.51	-0.7
267,992	-		GFF3444	0.65	+0.1
268,007	-		GFF3444	0.67	-1.0
268,054	+		GFF3444	0.71	-3.2
268,508	+		GFF3445	0.29	+0.5
268,584	-		GFF3445	0.51	-0.8
269,091	-		GFF3446	0.30	-0.9
269,091	-		GFF3446	0.30	-1.0
269,111	+		GFF3446	0.32	-0.0
269,139	+		GFF3446	0.35	-0.7
269,510	+		GFF3446	0.72	-0.7
269,511	-		GFF3446	0.72	+0.3