Strain Fitness in Variovorax sp. SCN45 around GFF3160

Experiment: Community=Locust bean gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=1
597,283	+		GFF3159	0.73	+0.5
597,284	-		GFF3159	0.73	+0.1
597,554	+		GFF3159	0.83	+0.5
597,555	-		GFF3159	0.83	-1.2
597,605	+		GFF3159	0.84	-0.3
597,606	-		GFF3159	0.84	+1.1
597,974	+				-1.3
597,974	+				-0.3
597,974	+				-0.5
598,137	+				-0.3
598,137	+				+0.4
598,356	+		GFF3160	0.26	-0.0
598,490	+		GFF3160	0.39	-1.2
598,491	-		GFF3160	0.39	-0.7
598,972	-		GFF3160	0.88	-0.9
599,525	-		GFF3161	0.36	-0.6