Experiment: Community=Locust bean gum; Passage=1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2863 and GFF2864 are separated by 8 nucleotides GFF2864 and GFF2865 are separated by 14 nucleotides GFF2865 and GFF2866 are separated by 112 nucleotides
GFF2863 - no description, at 286,763 to 287,440
GFF2863
GFF2864 - no description, at 287,449 to 287,967
GFF2864
GFF2865 - Uncharacterized MFS-type transporter, at 287,982 to 289,511
GFF2865
GFF2866 - Uncharacterized MFS-type transporter, at 289,624 to 290,787
GFF2866
Position (kb) 287
288
289
290 Strain fitness (log2 ratio) -2
-1
0
1
2 at 287.031 kb on + strand, within GFF2863 at 287.031 kb on + strand, within GFF2863 at 287.031 kb on + strand, within GFF2863 at 287.031 kb on + strand, within GFF2863 at 287.073 kb on + strand, within GFF2863 at 287.073 kb on + strand, within GFF2863 at 287.073 kb on + strand, within GFF2863 at 287.073 kb on + strand, within GFF2863 at 287.073 kb on + strand, within GFF2863 at 287.073 kb on + strand, within GFF2863 at 287.073 kb on + strand, within GFF2863 at 287.073 kb on + strand, within GFF2863 at 287.074 kb on - strand, within GFF2863 at 287.074 kb on - strand, within GFF2863 at 287.074 kb on - strand, within GFF2863 at 287.074 kb on - strand, within GFF2863 at 287.074 kb on - strand, within GFF2863 at 287.074 kb on - strand, within GFF2863 at 287.074 kb on - strand, within GFF2863 at 287.074 kb on - strand, within GFF2863 at 287.074 kb on - strand, within GFF2863 at 287.223 kb on + strand, within GFF2863 at 287.223 kb on + strand, within GFF2863 at 287.223 kb on + strand, within GFF2863 at 287.223 kb on + strand, within GFF2863 at 287.223 kb on + strand, within GFF2863 at 287.223 kb on + strand, within GFF2863 at 287.224 kb on - strand, within GFF2863 at 287.224 kb on - strand, within GFF2863 at 287.224 kb on - strand, within GFF2863 at 287.229 kb on + strand, within GFF2863 at 287.229 kb on + strand, within GFF2863 at 287.229 kb on + strand, within GFF2863 at 287.229 kb on + strand, within GFF2863 at 287.229 kb on + strand, within GFF2863 at 287.229 kb on + strand, within GFF2863 at 287.229 kb on + strand, within GFF2863 at 287.229 kb on + strand, within GFF2863 at 287.229 kb on + strand, within GFF2863 at 287.229 kb on + strand, within GFF2863 at 287.229 kb on + strand, within GFF2863 at 287.229 kb on + strand, within GFF2863 at 287.229 kb on + strand, within GFF2863 at 287.229 kb on + strand, within GFF2863 at 287.229 kb on + strand, within GFF2863 at 287.229 kb on + strand, within GFF2863 at 287.229 kb on + strand, within GFF2863 at 287.230 kb on - strand, within GFF2863 at 287.230 kb on - strand, within GFF2863 at 287.230 kb on - strand, within GFF2863 at 287.230 kb on - strand, within GFF2863 at 287.230 kb on - strand, within GFF2863 at 287.230 kb on - strand, within GFF2863 at 287.230 kb on - strand, within GFF2863 at 287.230 kb on - strand, within GFF2863 at 287.230 kb on - strand, within GFF2863 at 287.230 kb on - strand, within GFF2863 at 287.230 kb on - strand, within GFF2863 at 287.230 kb on - strand, within GFF2863 at 287.230 kb on - strand, within GFF2863 at 287.230 kb on - strand, within GFF2863 at 287.230 kb on - strand, within GFF2863 at 287.230 kb on - strand, within GFF2863 at 287.230 kb on - strand, within GFF2863 at 287.230 kb on - strand, within GFF2863 at 287.230 kb on - strand, within GFF2863 at 287.230 kb on - strand, within GFF2863 at 287.230 kb on - strand, within GFF2863 at 287.230 kb on - strand, within GFF2863 at 287.230 kb on - strand, within GFF2863 at 287.603 kb on - strand, within GFF2864 at 287.603 kb on - strand, within GFF2864 at 287.603 kb on - strand, within GFF2864 at 287.603 kb on - strand, within GFF2864 at 287.603 kb on - strand, within GFF2864 at 287.664 kb on + strand, within GFF2864 at 287.664 kb on + strand, within GFF2864 at 287.664 kb on + strand, within GFF2864 at 287.664 kb on + strand, within GFF2864 at 287.664 kb on + strand, within GFF2864 at 287.664 kb on + strand, within GFF2864 at 287.664 kb on + strand, within GFF2864 at 287.664 kb on + strand, within GFF2864 at 287.664 kb on + strand, within GFF2864 at 287.664 kb on + strand, within GFF2864 at 287.664 kb on + strand, within GFF2864 at 287.664 kb on + strand, within GFF2864 at 287.665 kb on - strand, within GFF2864 at 287.665 kb on - strand, within GFF2864 at 287.665 kb on - strand, within GFF2864 at 287.665 kb on - strand, within GFF2864 at 287.954 kb on + strand at 287.954 kb on + strand at 287.954 kb on + strand at 287.954 kb on + strand at 287.954 kb on + strand at 287.954 kb on + strand at 287.954 kb on + strand at 287.954 kb on + strand at 287.955 kb on - strand at 287.955 kb on - strand at 287.955 kb on - strand at 287.955 kb on - strand at 287.955 kb on - strand at 287.955 kb on - strand at 287.955 kb on - strand at 287.955 kb on - strand at 287.955 kb on - strand at 287.955 kb on - strand at 287.955 kb on - strand at 287.955 kb on - strand at 288.430 kb on + strand, within GFF2865 at 288.430 kb on + strand, within GFF2865 at 288.430 kb on + strand, within GFF2865 at 288.431 kb on - strand, within GFF2865 at 288.485 kb on + strand, within GFF2865 at 288.485 kb on + strand, within GFF2865 at 288.485 kb on + strand, within GFF2865 at 288.485 kb on + strand, within GFF2865 at 288.485 kb on + strand, within GFF2865 at 288.485 kb on + strand, within GFF2865 at 288.485 kb on + strand, within GFF2865 at 288.486 kb on - strand, within GFF2865 at 288.486 kb on - strand, within GFF2865 at 288.486 kb on - strand, within GFF2865 at 288.486 kb on - strand, within GFF2865 at 288.486 kb on - strand, within GFF2865 at 288.486 kb on - strand, within GFF2865 at 288.486 kb on - strand, within GFF2865 at 288.486 kb on - strand, within GFF2865 at 288.486 kb on - strand, within GFF2865 at 288.486 kb on - strand, within GFF2865 at 288.486 kb on - strand, within GFF2865 at 288.486 kb on - strand, within GFF2865 at 288.487 kb on + strand, within GFF2865 at 288.487 kb on + strand, within GFF2865 at 288.655 kb on + strand, within GFF2865 at 288.655 kb on + strand, within GFF2865 at 288.853 kb on + strand, within GFF2865 at 288.853 kb on + strand, within GFF2865 at 288.853 kb on + strand, within GFF2865 at 288.853 kb on + strand, within GFF2865 at 288.853 kb on + strand, within GFF2865 at 288.853 kb on + strand, within GFF2865 at 288.853 kb on + strand, within GFF2865 at 288.853 kb on + strand, within GFF2865 at 288.854 kb on - strand, within GFF2865 at 288.854 kb on - strand, within GFF2865 at 288.854 kb on - strand, within GFF2865 at 288.854 kb on - strand, within GFF2865 at 288.881 kb on + strand, within GFF2865 at 288.881 kb on + strand, within GFF2865 at 288.881 kb on + strand, within GFF2865 at 288.882 kb on - strand, within GFF2865 at 288.882 kb on - strand, within GFF2865 at 288.882 kb on - strand, within GFF2865 at 289.279 kb on + strand, within GFF2865 at 289.279 kb on + strand, within GFF2865 at 289.279 kb on + strand, within GFF2865 at 289.279 kb on + strand, within GFF2865 at 289.279 kb on + strand, within GFF2865 at 289.279 kb on + strand, within GFF2865 at 289.280 kb on - strand, within GFF2865 at 289.280 kb on - strand, within GFF2865 at 289.280 kb on - strand, within GFF2865 at 289.280 kb on - strand, within GFF2865 at 289.280 kb on - strand, within GFF2865 at 289.333 kb on + strand, within GFF2865 at 289.333 kb on + strand, within GFF2865 at 289.333 kb on + strand, within GFF2865 at 289.333 kb on + strand, within GFF2865 at 289.334 kb on - strand, within GFF2865 at 289.334 kb on - strand, within GFF2865 at 289.334 kb on - strand, within GFF2865 at 289.334 kb on - strand, within GFF2865 at 289.334 kb on - strand, within GFF2865 at 289.334 kb on - strand, within GFF2865 at 289.447 kb on + strand at 289.447 kb on + strand at 289.447 kb on + strand at 289.447 kb on + strand at 289.448 kb on - strand at 289.448 kb on - strand at 289.448 kb on - strand at 289.499 kb on + strand at 289.499 kb on + strand at 289.499 kb on + strand at 289.499 kb on + strand at 289.500 kb on - strand at 289.500 kb on - strand at 289.500 kb on - strand at 289.500 kb on - strand at 289.546 kb on - strand at 289.546 kb on - strand at 289.563 kb on + strand at 289.564 kb on - strand at 289.564 kb on - strand at 289.564 kb on - strand at 289.644 kb on + strand at 289.644 kb on + strand at 289.644 kb on + strand at 289.644 kb on + strand at 289.644 kb on + strand at 289.644 kb on + strand at 289.644 kb on + strand at 289.644 kb on + strand at 289.644 kb on + strand at 289.644 kb on + strand at 289.645 kb on - strand at 289.645 kb on - strand at 289.645 kb on - strand at 289.645 kb on - strand at 289.645 kb on - strand at 289.910 kb on + strand, within GFF2866 at 289.910 kb on + strand, within GFF2866 at 289.911 kb on - strand, within GFF2866 at 289.911 kb on - strand, within GFF2866 at 289.911 kb on - strand, within GFF2866
Per-strain Table
Position Strand Gene LocusTag Fraction Community=Locust bean gum; Passage=1 remove 287,031 + GFF2863 0.40 -0.9 287,031 + GFF2863 0.40 +1.1 287,031 + GFF2863 0.40 -0.5 287,031 + GFF2863 0.40 -0.2 287,073 + GFF2863 0.46 +0.8 287,073 + GFF2863 0.46 -1.1 287,073 + GFF2863 0.46 +0.2 287,073 + GFF2863 0.46 -0.4 287,073 + GFF2863 0.46 -0.8 287,073 + GFF2863 0.46 -1.7 287,073 + GFF2863 0.46 -1.1 287,073 + GFF2863 0.46 -0.1 287,074 - GFF2863 0.46 -0.5 287,074 - GFF2863 0.46 -0.5 287,074 - GFF2863 0.46 -1.6 287,074 - GFF2863 0.46 -0.4 287,074 - GFF2863 0.46 -0.4 287,074 - GFF2863 0.46 -0.6 287,074 - GFF2863 0.46 -0.2 287,074 - GFF2863 0.46 -1.1 287,074 - GFF2863 0.46 -0.6 287,223 + GFF2863 0.68 -1.1 287,223 + GFF2863 0.68 -0.1 287,223 + GFF2863 0.68 +0.1 287,223 + GFF2863 0.68 -0.2 287,223 + GFF2863 0.68 -0.7 287,223 + GFF2863 0.68 +0.0 287,224 - GFF2863 0.68 -0.5 287,224 - GFF2863 0.68 +0.6 287,224 - GFF2863 0.68 -0.1 287,229 + GFF2863 0.69 +0.3 287,229 + GFF2863 0.69 -0.5 287,229 + GFF2863 0.69 -0.4 287,229 + GFF2863 0.69 -0.0 287,229 + GFF2863 0.69 -0.9 287,229 + GFF2863 0.69 -0.1 287,229 + GFF2863 0.69 +0.5 287,229 + GFF2863 0.69 -0.5 287,229 + GFF2863 0.69 +1.5 287,229 + GFF2863 0.69 -0.0 287,229 + GFF2863 0.69 -0.9 287,229 + GFF2863 0.69 -1.1 287,229 + GFF2863 0.69 +1.5 287,229 + GFF2863 0.69 +1.4 287,229 + GFF2863 0.69 +0.2 287,229 + GFF2863 0.69 -0.5 287,229 + GFF2863 0.69 -0.7 287,230 - GFF2863 0.69 -0.4 287,230 - GFF2863 0.69 -1.5 287,230 - GFF2863 0.69 -0.5 287,230 - GFF2863 0.69 -1.3 287,230 - GFF2863 0.69 +0.0 287,230 - GFF2863 0.69 -0.2 287,230 - GFF2863 0.69 +1.3 287,230 - GFF2863 0.69 -1.1 287,230 - GFF2863 0.69 -0.7 287,230 - GFF2863 0.69 -1.1 287,230 - GFF2863 0.69 +0.1 287,230 - GFF2863 0.69 -0.1 287,230 - GFF2863 0.69 +1.8 287,230 - GFF2863 0.69 -0.2 287,230 - GFF2863 0.69 +0.2 287,230 - GFF2863 0.69 -0.8 287,230 - GFF2863 0.69 -0.7 287,230 - GFF2863 0.69 -0.2 287,230 - GFF2863 0.69 +0.1 287,230 - GFF2863 0.69 +0.6 287,230 - GFF2863 0.69 +0.1 287,230 - GFF2863 0.69 -0.2 287,230 - GFF2863 0.69 +1.0 287,603 - GFF2864 0.30 -0.1 287,603 - GFF2864 0.30 -0.7 287,603 - GFF2864 0.30 -1.1 287,603 - GFF2864 0.30 -1.0 287,603 - GFF2864 0.30 +1.2 287,664 + GFF2864 0.41 +1.5 287,664 + GFF2864 0.41 -0.9 287,664 + GFF2864 0.41 +0.5 287,664 + GFF2864 0.41 -0.6 287,664 + GFF2864 0.41 -1.1 287,664 + GFF2864 0.41 -0.5 287,664 + GFF2864 0.41 +0.0 287,664 + GFF2864 0.41 -0.0 287,664 + GFF2864 0.41 +0.8 287,664 + GFF2864 0.41 +0.4 287,664 + GFF2864 0.41 +1.1 287,664 + GFF2864 0.41 +0.5 287,665 - GFF2864 0.42 +1.5 287,665 - GFF2864 0.42 -0.8 287,665 - GFF2864 0.42 +0.4 287,665 - GFF2864 0.42 +1.5 287,954 + -0.3 287,954 + -0.1 287,954 + -0.5 287,954 + -0.0 287,954 + -1.1 287,954 + -0.2 287,954 + -0.0 287,954 + +1.5 287,955 - -2.6 287,955 - +0.8 287,955 - -0.8 287,955 - +0.3 287,955 - -0.8 287,955 - -0.3 287,955 - -1.3 287,955 - +0.0 287,955 - -2.4 287,955 - +1.7 287,955 - +1.2 287,955 - -0.1 288,430 + GFF2865 0.29 +0.1 288,430 + GFF2865 0.29 -1.3 288,430 + GFF2865 0.29 +0.8 288,431 - GFF2865 0.29 +0.6 288,485 + GFF2865 0.33 -0.2 288,485 + GFF2865 0.33 -0.0 288,485 + GFF2865 0.33 +1.1 288,485 + GFF2865 0.33 -0.1 288,485 + GFF2865 0.33 -0.6 288,485 + GFF2865 0.33 -2.1 288,485 + GFF2865 0.33 +0.5 288,486 - GFF2865 0.33 -0.2 288,486 - GFF2865 0.33 -1.5 288,486 - GFF2865 0.33 +0.2 288,486 - GFF2865 0.33 +1.5 288,486 - GFF2865 0.33 -0.1 288,486 - GFF2865 0.33 +0.1 288,486 - GFF2865 0.33 +1.3 288,486 - GFF2865 0.33 +0.2 288,486 - GFF2865 0.33 -0.1 288,486 - GFF2865 0.33 +0.6 288,486 - GFF2865 0.33 -0.9 288,486 - GFF2865 0.33 +0.0 288,487 + GFF2865 0.33 -0.4 288,487 + GFF2865 0.33 +0.5 288,655 + GFF2865 0.44 -1.3 288,655 + GFF2865 0.44 -0.1 288,853 + GFF2865 0.57 +1.7 288,853 + GFF2865 0.57 +0.5 288,853 + GFF2865 0.57 +0.2 288,853 + GFF2865 0.57 -0.6 288,853 + GFF2865 0.57 +1.8 288,853 + GFF2865 0.57 -1.3 288,853 + GFF2865 0.57 -0.3 288,853 + GFF2865 0.57 -0.0 288,854 - GFF2865 0.57 -0.0 288,854 - GFF2865 0.57 +0.2 288,854 - GFF2865 0.57 -0.7 288,854 - GFF2865 0.57 -0.1 288,881 + GFF2865 0.59 -0.2 288,881 + GFF2865 0.59 +1.2 288,881 + GFF2865 0.59 -0.1 288,882 - GFF2865 0.59 +0.0 288,882 - GFF2865 0.59 -1.1 288,882 - GFF2865 0.59 +0.1 289,279 + GFF2865 0.85 +0.7 289,279 + GFF2865 0.85 +0.0 289,279 + GFF2865 0.85 +0.1 289,279 + GFF2865 0.85 -0.7 289,279 + GFF2865 0.85 +0.2 289,279 + GFF2865 0.85 +1.1 289,280 - GFF2865 0.85 +0.1 289,280 - GFF2865 0.85 -0.2 289,280 - GFF2865 0.85 +1.4 289,280 - GFF2865 0.85 +0.8 289,280 - GFF2865 0.85 +0.0 289,333 + GFF2865 0.88 -0.1 289,333 + GFF2865 0.88 +0.6 289,333 + GFF2865 0.88 -0.4 289,333 + GFF2865 0.88 -0.1 289,334 - GFF2865 0.88 +0.8 289,334 - GFF2865 0.88 -0.3 289,334 - GFF2865 0.88 -0.1 289,334 - GFF2865 0.88 +1.5 289,334 - GFF2865 0.88 -0.2 289,334 - GFF2865 0.88 -0.3 289,447 + +0.3 289,447 + +0.3 289,447 + -0.0 289,447 + -0.8 289,448 - -0.3 289,448 - +0.3 289,448 - -0.3 289,499 + -0.5 289,499 + -1.7 289,499 + +0.1 289,499 + -0.4 289,500 - -0.3 289,500 - +1.1 289,500 - -0.3 289,500 - +0.5 289,546 - +0.9 289,546 - -0.9 289,563 + -0.1 289,564 - -0.1 289,564 - -0.5 289,564 - -1.6 289,644 + +0.2 289,644 + -0.6 289,644 + -0.7 289,644 + -0.2 289,644 + +0.2 289,644 + -0.7 289,644 + +0.5 289,644 + +0.0 289,644 + -0.5 289,644 + -1.7 289,645 - -0.4 289,645 - -0.4 289,645 - -1.0 289,645 - -0.3 289,645 - -0.5 289,910 + GFF2866 0.25 -1.3 289,910 + GFF2866 0.25 -0.6 289,911 - GFF2866 0.25 +1.5 289,911 - GFF2866 0.25 -0.0 289,911 - GFF2866 0.25 -0.4
Or see this region's nucleotide sequence