Strain Fitness in Variovorax sp. SCN45 around GFF2692

Experiment: Community=Locust bean gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=1
120,217	+				-0.2
120,217	+				+0.9
120,218	-				+3.1
120,360	+		GFF2691	0.15	-0.5
120,361	-		GFF2691	0.15	+0.5
120,361	-		GFF2691	0.15	-0.3
120,749	+		GFF2691	0.72	-1.5
120,749	+		GFF2691	0.72	-0.5
120,750	-		GFF2691	0.73	+0.2
120,782	+		GFF2691	0.77	+0.7
120,867	-				-0.3
120,875	+				-0.1
120,875	+				-0.2
120,876	-				+0.7
121,115	-		GFF2692	0.32	+0.2
121,237	+		GFF2692	0.53	+1.1
121,301	-		GFF2692	0.64	+0.3
121,351	+		GFF2692	0.73	-0.1
121,636	-		GFF2693	0.16	+1.1
121,636	-		GFF2693	0.16	-0.5
121,665	+		GFF2693	0.19	+0.2
121,665	+		GFF2693	0.19	+0.3
121,734	+		GFF2693	0.25	-0.2
121,734	+		GFF2693	0.25	-0.5
121,734	+		GFF2693	0.25	+1.0
121,735	-		GFF2693	0.25	-1.5
121,735	-		GFF2693	0.25	-0.6
121,896	+		GFF2693	0.41	-0.3
121,897	-		GFF2693	0.42	-0.4
122,304	+		GFF2693	0.82	+1.2
122,304	+		GFF2693	0.82	-2.3
122,305	-		GFF2693	0.82	-0.3