Strain Fitness in Variovorax sp. SCN45 around GFF2364

Experiment: Community=Locust bean gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=1
416,300	+				+0.4
416,300	+				-1.2
416,301	-				-1.9
416,301	-				+0.5
416,371	+				-0.0
416,387	+				+1.0
416,387	+				+1.4
416,387	+				-0.5
416,388	-				+0.3
416,477	+		GFF2363	0.12	+0.2
416,528	+		GFF2363	0.18	+0.7
416,653	+		GFF2363	0.33	+0.0
416,792	+		GFF2363	0.50	-1.0
416,793	-		GFF2363	0.50	+0.5
416,793	-		GFF2363	0.50	-0.1
417,116	+		GFF2363	0.90	+0.2
417,116	+		GFF2363	0.90	-0.6
417,116	+		GFF2363	0.90	-0.6
417,116	+		GFF2363	0.90	-1.0
417,116	+		GFF2363	0.90	-0.0
417,117	-				-0.4
417,117	-				-0.9
417,117	-				+0.7
417,117	-				-0.5
417,117	-				+0.4
417,117	-				-0.1
417,234	+				-1.7
417,234	+				-0.6
417,234	+				-0.1
417,235	-				+0.4
417,235	-				+0.4
417,235	-				-0.1
417,235	-				-0.4
417,235	-				+0.4
417,249	+				-0.1
417,250	-				-0.4
417,414	+		GFF2364	0.14	-0.3
417,415	-		GFF2364	0.14	-0.8
417,564	+		GFF2364	0.24	+0.2
417,713	+		GFF2364	0.34	-0.0
417,713	+		GFF2364	0.34	+0.7
417,713	+		GFF2364	0.34	+0.6
417,713	+		GFF2364	0.34	+1.7
417,714	-		GFF2364	0.34	+0.1
418,332	+		GFF2364	0.76	-0.4
418,332	+		GFF2364	0.76	+0.3
418,333	-		GFF2364	0.76	+1.4
418,921	+		GFF2365	0.13	+0.4
418,921	+		GFF2365	0.13	-0.3
419,091	+		GFF2365	0.24	-1.3
419,091	+		GFF2365	0.24	+0.1
419,097	+		GFF2365	0.25	-0.0
419,097	+		GFF2365	0.25	-0.3
419,097	+		GFF2365	0.25	-0.8
419,097	+		GFF2365	0.25	-1.6
419,098	-		GFF2365	0.25	-0.2