Strain Fitness in Variovorax sp. SCN45 around GFF2136

Experiment: Community=Locust bean gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=1
183,649	+		GFF2134	0.36	-0.3
183,812	-		GFF2134	0.55	-0.2
184,090	+		GFF2134	0.86	+0.1
184,198	+				+0.3
184,198	+				-0.5
184,198	+				+0.4
184,199	-				+0.7
184,199	-				+0.2
184,292	-		GFF2135	0.15	+0.7
184,292	-		GFF2135	0.15	+0.7
184,741	+		GFF2136	0.12	-0.4
184,742	-		GFF2136	0.12	+0.4
185,004	-		GFF2136	0.39	-1.0
185,203	+		GFF2136	0.60	-0.8
185,204	-		GFF2136	0.60	-0.1
185,204	-		GFF2136	0.60	-1.4
185,448	+		GFF2136	0.85	-1.6
185,448	+		GFF2136	0.85	-0.7
185,448	+		GFF2136	0.85	+1.7
185,828	-		GFF2137	0.22	-0.5
186,365	-		GFF2137	0.71	-0.3
186,415	+		GFF2137	0.76	-0.5
186,466	+		GFF2137	0.80	-0.3
186,467	-		GFF2137	0.80	-0.7
186,467	-		GFF2137	0.80	-0.8
186,467	-		GFF2137	0.80	-1.0
186,550	+		GFF2137	0.88	-2.4
186,550	+		GFF2137	0.88	-0.8
186,550	+		GFF2137	0.88	-0.7
186,551	-		GFF2137	0.88	-1.8
186,551	-		GFF2137	0.88	-0.6