Strain Fitness in Variovorax sp. SCN45 around GFF1529

Experiment: Community=Locust bean gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=1
125,951	-		GFF1528	0.28	-0.3
125,951	-		GFF1528	0.28	-0.6
125,951	-		GFF1528	0.28	-0.4
126,025	+		GFF1528	0.33	-0.9
126,026	-		GFF1528	0.34	+0.0
126,037	+		GFF1528	0.34	-0.3
126,037	+		GFF1528	0.34	-0.2
126,038	-		GFF1528	0.35	-0.6
126,050	+		GFF1528	0.35	-0.4
126,050	+		GFF1528	0.35	-0.4
126,050	+		GFF1528	0.35	-0.3
126,050	+		GFF1528	0.35	-0.0
126,050	+		GFF1528	0.35	+0.4
126,050	+		GFF1528	0.35	-0.3
126,051	-		GFF1528	0.36	-0.7
126,051	-		GFF1528	0.36	-0.3
126,051	-		GFF1528	0.36	-0.4
126,136	+		GFF1528	0.42	+1.3
126,136	+		GFF1528	0.42	-1.2
126,136	+		GFF1528	0.42	-0.8
126,136	+		GFF1528	0.42	+0.7
126,136	+		GFF1528	0.42	+1.7
126,136	+		GFF1528	0.42	-0.7
126,137	-		GFF1528	0.42	+0.9
126,137	-		GFF1528	0.42	+1.4
126,137	-		GFF1528	0.42	-0.6
126,137	-		GFF1528	0.42	+0.0
126,137	-		GFF1528	0.42	+0.4
126,137	-		GFF1528	0.42	+0.6
126,138	+		GFF1528	0.43	-0.1
126,138	+		GFF1528	0.43	-1.6
126,138	+		GFF1528	0.43	+0.4
126,138	+		GFF1528	0.43	+0.0
126,139	-		GFF1528	0.43	+0.3
126,258	-		GFF1528	0.52	-0.3
126,384	-		GFF1528	0.62	-0.1
126,493	+		GFF1528	0.71	+0.2
126,494	-		GFF1528	0.71	-1.0
126,506	-		GFF1528	0.72	+1.4
126,506	-		GFF1528	0.72	+1.7
126,506	-		GFF1528	0.72	-1.3
126,514	+		GFF1528	0.72	-0.1
126,515	-		GFF1528	0.73	-0.2
126,580	+		GFF1528	0.78	+0.1
126,580	+		GFF1528	0.78	+0.6
126,581	-		GFF1528	0.78	-0.0
126,581	-		GFF1528	0.78	-1.3
126,764	+				+0.3
126,854	-				+0.7
127,283	-		GFF1529	0.76	-1.2
127,456	+				-0.0
127,457	-				+0.1
127,463	-				+0.2
127,463	-				-0.5
127,578	+				+0.7
127,579	-				+1.1
128,048	+		GFF1530	0.61	-0.3
128,049	-		GFF1530	0.62	+0.0