Strain Fitness in Variovorax sp. SCN45 around GFF125

Experiment: Community=Locust bean gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=1
153,067	+		GFF124	0.33	-0.9
153,067	+		GFF124	0.33	-1.4
153,067	+		GFF124	0.33	-0.3
153,068	-		GFF124	0.33	-0.2
153,068	-		GFF124	0.33	-0.9
153,068	-		GFF124	0.33	-1.0
153,068	-		GFF124	0.33	-1.1
153,233	-		GFF124	0.46	-0.1
153,233	-		GFF124	0.46	-0.0
153,590	-		GFF124	0.73	-0.1
154,108	-		GFF125	0.17	+1.2
154,596	+		GFF125	0.64	-0.1
154,596	+		GFF125	0.64	+0.0
154,596	+		GFF125	0.64	-0.4
154,770	+		GFF125	0.80	+0.9
154,771	-		GFF125	0.80	+0.6
154,975	+				-0.4
154,976	-				-0.7
154,977	+				-1.9
154,978	-				+0.2
154,978	-				+1.2
154,978	-				-0.7
154,978	-				+0.5
155,238	+		GFF126	0.25	+0.7
155,239	-		GFF126	0.25	+1.9
155,258	+		GFF126	0.27	-0.6
155,258	+		GFF126	0.27	-0.1
155,259	-		GFF126	0.27	-0.3
155,367	-		GFF126	0.39	-0.0
155,864	+				+0.4
155,864	+				-0.5