Experiment: Community=Locust bean gum; Passage=1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1142 and GFF1143 are separated by 3 nucleotides GFF1143 and GFF1144 are separated by 38 nucleotides
GFF1142 - Efflux transport system, outer membrane factor (OMF) lipoprotein, at 457,586 to 459,019
GFF1142
GFF1143 - no description, at 459,023 to 459,760
GFF1143
GFF1144 - hypothetical protein, at 459,799 to 461,700
GFF1144
Position (kb) 459
460 Strain fitness (log2 ratio) -2
-1
0
1 at 458.166 kb on + strand, within GFF1142 at 458.166 kb on + strand, within GFF1142 at 458.167 kb on - strand, within GFF1142 at 458.313 kb on + strand, within GFF1142 at 458.313 kb on + strand, within GFF1142 at 458.314 kb on - strand, within GFF1142 at 458.314 kb on - strand, within GFF1142 at 458.314 kb on - strand, within GFF1142 at 458.457 kb on + strand, within GFF1142 at 458.457 kb on + strand, within GFF1142 at 458.571 kb on + strand, within GFF1142 at 458.571 kb on + strand, within GFF1142 at 458.571 kb on + strand, within GFF1142 at 458.571 kb on + strand, within GFF1142 at 458.571 kb on + strand, within GFF1142 at 458.571 kb on + strand, within GFF1142 at 458.571 kb on + strand, within GFF1142 at 458.571 kb on + strand, within GFF1142 at 458.571 kb on + strand, within GFF1142 at 458.572 kb on - strand, within GFF1142 at 458.572 kb on - strand, within GFF1142 at 458.572 kb on - strand, within GFF1142 at 458.572 kb on - strand, within GFF1142 at 458.572 kb on - strand, within GFF1142 at 458.572 kb on - strand, within GFF1142 at 458.572 kb on - strand, within GFF1142 at 458.572 kb on - strand, within GFF1142 at 458.572 kb on - strand, within GFF1142 at 458.572 kb on - strand, within GFF1142 at 458.572 kb on - strand, within GFF1142 at 458.572 kb on - strand, within GFF1142 at 458.572 kb on - strand, within GFF1142 at 458.631 kb on + strand, within GFF1142 at 458.631 kb on + strand, within GFF1142 at 458.631 kb on + strand, within GFF1142 at 458.631 kb on + strand, within GFF1142 at 458.631 kb on + strand, within GFF1142 at 458.632 kb on - strand, within GFF1142 at 458.632 kb on - strand, within GFF1142 at 458.632 kb on - strand, within GFF1142 at 458.632 kb on - strand, within GFF1142 at 458.632 kb on - strand, within GFF1142 at 458.632 kb on - strand, within GFF1142 at 458.632 kb on - strand, within GFF1142 at 458.757 kb on + strand, within GFF1142 at 458.757 kb on + strand, within GFF1142 at 458.757 kb on + strand, within GFF1142 at 458.757 kb on + strand, within GFF1142 at 458.757 kb on + strand, within GFF1142 at 458.757 kb on + strand, within GFF1142 at 458.757 kb on + strand, within GFF1142 at 458.757 kb on + strand, within GFF1142 at 458.757 kb on + strand, within GFF1142 at 458.757 kb on + strand, within GFF1142 at 458.758 kb on - strand, within GFF1142 at 458.758 kb on - strand, within GFF1142 at 458.758 kb on - strand, within GFF1142 at 458.758 kb on - strand, within GFF1142 at 458.758 kb on - strand, within GFF1142 at 458.763 kb on + strand, within GFF1142 at 458.763 kb on + strand, within GFF1142 at 458.763 kb on + strand, within GFF1142 at 458.763 kb on + strand, within GFF1142 at 458.763 kb on + strand, within GFF1142 at 458.763 kb on + strand, within GFF1142 at 458.763 kb on + strand, within GFF1142 at 458.763 kb on + strand, within GFF1142 at 458.763 kb on + strand, within GFF1142 at 458.763 kb on + strand, within GFF1142 at 458.764 kb on - strand, within GFF1142 at 458.764 kb on - strand, within GFF1142 at 458.764 kb on - strand, within GFF1142 at 458.764 kb on - strand, within GFF1142 at 459.304 kb on + strand, within GFF1143 at 459.305 kb on - strand, within GFF1143 at 459.305 kb on - strand, within GFF1143 at 459.305 kb on - strand, within GFF1143 at 459.305 kb on - strand, within GFF1143 at 459.597 kb on + strand, within GFF1143 at 459.597 kb on + strand, within GFF1143 at 459.597 kb on + strand, within GFF1143 at 459.598 kb on - strand, within GFF1143 at 459.598 kb on - strand, within GFF1143 at 459.598 kb on - strand, within GFF1143 at 459.598 kb on - strand, within GFF1143 at 459.651 kb on + strand, within GFF1143 at 459.651 kb on + strand, within GFF1143 at 459.651 kb on + strand, within GFF1143 at 459.651 kb on + strand, within GFF1143 at 459.651 kb on + strand, within GFF1143 at 459.651 kb on + strand, within GFF1143 at 459.651 kb on + strand, within GFF1143 at 459.652 kb on - strand, within GFF1143 at 459.652 kb on - strand, within GFF1143 at 459.652 kb on - strand, within GFF1143 at 459.772 kb on + strand at 459.772 kb on + strand at 459.772 kb on + strand at 459.772 kb on + strand at 459.772 kb on + strand at 459.772 kb on + strand at 459.772 kb on + strand at 459.772 kb on + strand at 459.773 kb on - strand at 459.773 kb on - strand at 459.773 kb on - strand at 459.773 kb on - strand at 459.773 kb on - strand at 459.773 kb on - strand at 459.773 kb on - strand at 459.773 kb on - strand at 459.773 kb on - strand at 459.773 kb on - strand at 459.777 kb on + strand at 459.777 kb on + strand at 459.778 kb on - strand at 459.778 kb on - strand at 459.778 kb on - strand at 459.778 kb on - strand at 459.821 kb on + strand at 459.821 kb on + strand at 459.821 kb on + strand at 459.822 kb on - strand at 459.822 kb on - strand at 459.822 kb on - strand at 459.822 kb on - strand at 459.822 kb on - strand at 459.822 kb on - strand at 459.835 kb on + strand at 459.835 kb on + strand at 459.835 kb on + strand at 459.835 kb on + strand at 459.835 kb on + strand at 459.836 kb on - strand at 459.836 kb on - strand at 459.836 kb on - strand at 459.836 kb on - strand at 459.836 kb on - strand at 459.836 kb on - strand at 459.836 kb on - strand at 459.961 kb on + strand at 459.961 kb on + strand at 459.961 kb on + strand at 459.962 kb on - strand at 459.962 kb on - strand at 459.962 kb on - strand at 460.331 kb on + strand, within GFF1144 at 460.331 kb on + strand, within GFF1144 at 460.331 kb on + strand, within GFF1144 at 460.477 kb on - strand, within GFF1144
Per-strain Table
Position Strand Gene LocusTag Fraction Community=Locust bean gum; Passage=1 remove 458,166 + GFF1142 0.40 +0.2 458,166 + GFF1142 0.40 -0.7 458,167 - GFF1142 0.41 +0.5 458,313 + GFF1142 0.51 +0.0 458,313 + GFF1142 0.51 +0.0 458,314 - GFF1142 0.51 -0.8 458,314 - GFF1142 0.51 +0.9 458,314 - GFF1142 0.51 -0.7 458,457 + GFF1142 0.61 -0.2 458,457 + GFF1142 0.61 +0.1 458,571 + GFF1142 0.69 -0.5 458,571 + GFF1142 0.69 +0.2 458,571 + GFF1142 0.69 -1.2 458,571 + GFF1142 0.69 +0.3 458,571 + GFF1142 0.69 -0.0 458,571 + GFF1142 0.69 +0.4 458,571 + GFF1142 0.69 -0.2 458,571 + GFF1142 0.69 +0.2 458,571 + GFF1142 0.69 -0.2 458,572 - GFF1142 0.69 -1.2 458,572 - GFF1142 0.69 -0.9 458,572 - GFF1142 0.69 -0.7 458,572 - GFF1142 0.69 +0.3 458,572 - GFF1142 0.69 +0.4 458,572 - GFF1142 0.69 -0.4 458,572 - GFF1142 0.69 -0.2 458,572 - GFF1142 0.69 -0.0 458,572 - GFF1142 0.69 -0.2 458,572 - GFF1142 0.69 -0.3 458,572 - GFF1142 0.69 +0.5 458,572 - GFF1142 0.69 -0.2 458,572 - GFF1142 0.69 -0.2 458,631 + GFF1142 0.73 -1.3 458,631 + GFF1142 0.73 +0.1 458,631 + GFF1142 0.73 -0.2 458,631 + GFF1142 0.73 +1.3 458,631 + GFF1142 0.73 -0.1 458,632 - GFF1142 0.73 +0.3 458,632 - GFF1142 0.73 -0.8 458,632 - GFF1142 0.73 -0.4 458,632 - GFF1142 0.73 -0.9 458,632 - GFF1142 0.73 +0.5 458,632 - GFF1142 0.73 -0.1 458,632 - GFF1142 0.73 -1.6 458,757 + GFF1142 0.82 -0.1 458,757 + GFF1142 0.82 -0.7 458,757 + GFF1142 0.82 -0.6 458,757 + GFF1142 0.82 -0.8 458,757 + GFF1142 0.82 -0.3 458,757 + GFF1142 0.82 +0.5 458,757 + GFF1142 0.82 +0.1 458,757 + GFF1142 0.82 +0.4 458,757 + GFF1142 0.82 -0.8 458,757 + GFF1142 0.82 +1.1 458,758 - GFF1142 0.82 +0.2 458,758 - GFF1142 0.82 +0.9 458,758 - GFF1142 0.82 -0.2 458,758 - GFF1142 0.82 -0.4 458,758 - GFF1142 0.82 -0.6 458,763 + GFF1142 0.82 +0.0 458,763 + GFF1142 0.82 -0.8 458,763 + GFF1142 0.82 +0.3 458,763 + GFF1142 0.82 -1.2 458,763 + GFF1142 0.82 -0.2 458,763 + GFF1142 0.82 -0.4 458,763 + GFF1142 0.82 +0.1 458,763 + GFF1142 0.82 +0.3 458,763 + GFF1142 0.82 +0.1 458,763 + GFF1142 0.82 -0.4 458,764 - GFF1142 0.82 -0.1 458,764 - GFF1142 0.82 +0.2 458,764 - GFF1142 0.82 -0.0 458,764 - GFF1142 0.82 +0.5 459,304 + GFF1143 0.38 -0.5 459,305 - GFF1143 0.38 -1.7 459,305 - GFF1143 0.38 +0.3 459,305 - GFF1143 0.38 -0.3 459,305 - GFF1143 0.38 -1.4 459,597 + GFF1143 0.78 -0.2 459,597 + GFF1143 0.78 -0.6 459,597 + GFF1143 0.78 -0.3 459,598 - GFF1143 0.78 -0.3 459,598 - GFF1143 0.78 -0.8 459,598 - GFF1143 0.78 -1.0 459,598 - GFF1143 0.78 +0.4 459,651 + GFF1143 0.85 -0.2 459,651 + GFF1143 0.85 -0.2 459,651 + GFF1143 0.85 -0.4 459,651 + GFF1143 0.85 -1.1 459,651 + GFF1143 0.85 -0.8 459,651 + GFF1143 0.85 -1.1 459,651 + GFF1143 0.85 -0.5 459,652 - GFF1143 0.85 +0.3 459,652 - GFF1143 0.85 -1.1 459,652 - GFF1143 0.85 -0.5 459,772 + -0.2 459,772 + +1.3 459,772 + +0.3 459,772 + -0.5 459,772 + +1.3 459,772 + +0.1 459,772 + -0.7 459,772 + +1.3 459,773 - +0.1 459,773 - +1.2 459,773 - -1.8 459,773 - +0.1 459,773 - -0.1 459,773 - -0.0 459,773 - -1.2 459,773 - -0.8 459,773 - -0.0 459,773 - -0.4 459,777 + -0.5 459,777 + -1.7 459,778 - +0.6 459,778 - -0.3 459,778 - -2.0 459,778 - -1.2 459,821 + +0.5 459,821 + -0.3 459,821 + -0.2 459,822 - -1.7 459,822 - -1.3 459,822 - +1.2 459,822 - +0.9 459,822 - +0.5 459,822 - +0.4 459,835 + -0.9 459,835 + -1.1 459,835 + +0.5 459,835 + -0.2 459,835 + +1.3 459,836 - -0.9 459,836 - +0.0 459,836 - -0.2 459,836 - -0.7 459,836 - +0.1 459,836 - -0.9 459,836 - -0.2 459,961 + -0.7 459,961 + -0.9 459,961 + -0.7 459,962 - +0.1 459,962 - -0.7 459,962 - -0.5 460,331 + GFF1144 0.28 +0.4 460,331 + GFF1144 0.28 -1.5 460,331 + GFF1144 0.28 +1.3 460,477 - GFF1144 0.36 -0.7
Or see this region's nucleotide sequence