Strain Fitness in Escherichia coli ECRC98 around JDDGAC_30195

Experiment: GB_JK32

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	GB_JK32
58,276	+		JDDGAC_30175	0.47	+1.6
58,276	+		JDDGAC_30175	0.47	-2.0
58,276	+		JDDGAC_30175	0.47	-1.3
58,277	-		JDDGAC_30175	0.47	-0.6
58,293	-		JDDGAC_30175	0.52	+0.7
58,351	-		JDDGAC_30175	0.69	-1.0
58,413	+		JDDGAC_30175	0.87	+1.0
58,413	+		JDDGAC_30175	0.87	+0.6
58,414	-		JDDGAC_30175	0.88	+0.1
58,449	+				+0.7
58,542	+				+0.9
58,546	-				-0.8
58,546	-				+0.3
58,567	+				+2.7
58,577	+				-0.4
58,648	+				-0.9
58,676	+				-0.5
58,676	+				-0.5
58,676	+				-0.6
58,746	+	repA2	JDDGAC_30180	0.20	-0.4
58,746	+	repA2	JDDGAC_30180	0.20	-2.4
58,747	-	repA2	JDDGAC_30180	0.20	-2.2
58,789	+	repA2	JDDGAC_30180	0.37	+2.3
58,789	+	repA2	JDDGAC_30180	0.37	-0.8
58,825	+	repA2	JDDGAC_30180	0.51	-0.4
58,826	-	repA2	JDDGAC_30180	0.51	-2.2
58,826	-	repA2	JDDGAC_30180	0.51	+0.9
58,848	+	repA2	JDDGAC_30180	0.60	+1.6
58,848	+	repA2	JDDGAC_30180	0.60	-1.4
58,849	-	repA2	JDDGAC_30180	0.60	-0.2
58,851	-	repA2	JDDGAC_30180	0.61	-1.4
58,960	-				-0.1
58,983	+				+1.9
58,989	+				-2.1
59,179	-				-0.0
59,184	+				+1.6
59,237	+	tap	JDDGAC_30190	0.69	+0.6
59,237	+	tap	JDDGAC_30190	0.69	+0.2
59,237	+	tap	JDDGAC_30190	0.69	+1.1
59,274	-				+2.1
59,274	-				+1.5
59,274	-				+1.6
59,274	-				+0.1
59,679	-	repA	JDDGAC_30195	0.50	-2.3
59,873	+	repA	JDDGAC_30195	0.72	-0.2
60,218	-				+0.5
60,394	-				+1.6
60,441	-				+2.6
60,470	+				-1.4
60,470	+				-4.3
60,470	+				-1.6
60,471	-				-1.6
60,592	+				-4.1
60,707	+				+0.8
60,718	-				-0.3
60,749	+				-0.2
60,750	-				+1.2
60,800	+				+0.2
60,827	-				-1.1
60,904	-				-0.0
60,914	+				+1.2
60,915	-				-0.1
60,920	+				-0.0
60,929	+				+1.3
60,939	+				+0.4
60,939	+				-1.0
60,939	+				+0.2
60,939	+				-2.2
60,940	-				-1.4
60,940	-				-1.4
60,940	-				+1.6
60,940	-				+0.4
60,995	+				-3.1
61,084	-	putA1	JDDGAC_30200	0.20	+3.5
61,084	-	putA1	JDDGAC_30200	0.20	+0.6