Strain Fitness in Escherichia coli ECRC98 around JDDGAC_23645

Experiment: GB_JK32

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	GB_JK32
4,525,545	+	tas	JDDGAC_23640	0.15	+1.2
4,525,639	+	tas	JDDGAC_23640	0.24	-3.7
4,525,664	+	tas	JDDGAC_23640	0.26	-1.4
4,525,665	-	tas	JDDGAC_23640	0.26	-1.2
4,525,667	+	tas	JDDGAC_23640	0.26	-1.7
4,525,668	-	tas	JDDGAC_23640	0.27	-1.1
4,525,736	-	tas	JDDGAC_23640	0.33	-1.4
4,525,782	+	tas	JDDGAC_23640	0.37	-2.3
4,525,782	+	tas	JDDGAC_23640	0.37	+0.9
4,525,832	+	tas	JDDGAC_23640	0.42	-1.9
4,525,832	+	tas	JDDGAC_23640	0.42	-2.2
4,525,833	-	tas	JDDGAC_23640	0.42	+0.5
4,525,868	-	tas	JDDGAC_23640	0.46	+1.1
4,525,909	+	tas	JDDGAC_23640	0.50	-1.3
4,526,060	-	tas	JDDGAC_23640	0.64	-2.9
4,526,184	-	tas	JDDGAC_23640	0.76	+0.3
4,526,184	-	tas	JDDGAC_23640	0.76	+0.3
4,526,230	+	tas	JDDGAC_23640	0.80	-1.1
4,526,230	+	tas	JDDGAC_23640	0.80	+0.9
4,526,231	-	tas	JDDGAC_23640	0.81	-3.0
4,526,231	-	tas	JDDGAC_23640	0.81	-0.7
4,526,417	+				-1.1
4,526,417	+				-1.0
4,526,417	+				-0.9
4,526,425	+				-3.3
4,526,447	+				-0.4
4,526,460	+				+1.0
4,526,460	+				-1.8
4,526,534	+				-1.8
4,526,534	+				+2.5
4,526,688	+	ygdR	JDDGAC_23645	0.68	-2.6
4,526,688	+	ygdR	JDDGAC_23645	0.68	-1.3
4,526,783	+				+0.8
4,526,783	+				+0.0
4,526,784	-				-1.0
4,526,784	-				+1.5
4,526,784	-				-2.3
4,526,784	-				-0.1
4,526,789	-				-1.7
4,526,789	-				+1.4
4,526,791	+				-0.8
4,526,791	+				-2.2
4,526,792	-				+1.4
4,526,792	-				+0.2
4,526,792	-				+0.1
4,526,801	-				-1.4
4,526,813	+				+1.3
4,526,813	+				+2.0
4,526,813	+				-3.2
4,526,813	+				-0.6
4,526,813	+				+0.1
4,526,814	-				+0.9
4,526,814	-				+2.2
4,526,814	-				-1.5
4,526,815	+				-1.8
4,526,815	+				-0.5
4,526,815	+				-0.5
4,526,815	+				-0.5
4,526,816	-				+1.2
4,526,816	-				-0.6
4,526,816	-				+1.6
4,526,816	-				+0.8
4,526,817	+				-2.7
4,526,818	-				-0.8
4,526,818	-				-0.5
4,526,818	-				-1.5
4,526,966	+				+0.5
4,526,966	+				+0.2
4,526,966	+				-1.0
4,526,967	-				+2.8
4,526,972	+	ygdQ	JDDGAC_23650	0.11	-0.3
4,526,972	+	ygdQ	JDDGAC_23650	0.11	-1.0
4,526,972	+	ygdQ	JDDGAC_23650	0.11	-1.5
4,526,973	-	ygdQ	JDDGAC_23650	0.11	+0.0
4,527,116	-	ygdQ	JDDGAC_23650	0.31	-0.7
4,527,142	-	ygdQ	JDDGAC_23650	0.34	-1.7
4,527,144	+	ygdQ	JDDGAC_23650	0.35	-1.7
4,527,313	-	ygdQ	JDDGAC_23650	0.58	+1.5
4,527,313	-	ygdQ	JDDGAC_23650	0.58	+0.1
4,527,370	+	ygdQ	JDDGAC_23650	0.66	+0.4
4,527,435	+	ygdQ	JDDGAC_23650	0.75	-1.4
4,527,519	+	ygdQ	JDDGAC_23650	0.87	-0.3
4,527,522	+	ygdQ	JDDGAC_23650	0.88	+2.1
4,527,562	-				+1.6
4,527,604	+				+2.0
4,527,611	+				+1.7
4,527,612	-				+0.2
4,527,640	+				-0.6
4,527,644	+				-1.4
4,527,644	+				-1.1
4,527,644	+				+0.6
4,527,644	+				+1.0
4,527,645	-				-2.1
4,527,645	-				+1.5
4,527,645	-				+0.4
4,527,645	-				-0.7
4,527,645	-				+1.7
4,527,646	+				-1.1