Strain Fitness in Escherichia coli ECRC98 around JDDGAC_19070

Experiment: GB_JK32

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	GB_JK32
3,626,756	-	espB	JDDGAC_19055	0.78	-0.8
3,626,787	-	espB	JDDGAC_19055	0.81	-2.0
3,626,841	+	espB	JDDGAC_19055	0.87	-1.2
3,626,843	+	espB	JDDGAC_19055	0.87	+1.5
3,626,874	-				-1.2
3,626,894	+				-0.9
3,626,894	+				-2.2
3,626,896	+				-1.7
3,626,897	-				-0.3
3,626,937	-				+1.2
3,626,956	+				+0.0
3,626,957	-				+1.6
3,626,988	-				+0.6
3,627,002	+				-0.3
3,627,002	+				-0.3
3,627,002	+				-1.7
3,627,003	-				+0.4
3,627,027	+	cesD2	JDDGAC_19060	0.13	-0.9
3,627,034	+	cesD2	JDDGAC_19060	0.15	+1.1
3,627,035	-	cesD2	JDDGAC_19060	0.15	+0.3
3,627,171	-	cesD2	JDDGAC_19060	0.49	+0.9
3,627,306	+	cesD2	JDDGAC_19060	0.82	-2.1
3,627,306	+	cesD2	JDDGAC_19060	0.82	-3.3
3,627,306	+	cesD2	JDDGAC_19060	0.82	-1.6
3,627,306	+	cesD2	JDDGAC_19060	0.82	+0.3
3,627,458	-	escF	JDDGAC_19065	0.19	+0.0
3,627,667	-				-2.2
3,627,706	-	escG	JDDGAC_19070	0.23	-1.3
3,627,874	+	escG	JDDGAC_19070	0.83	-2.2
3,627,984	+				+0.3
3,627,990	+				-0.0
3,627,991	-				-2.8
3,628,005	+				-1.4
3,628,020	+				-0.4
3,628,021	-				+0.7
3,628,035	+				-1.4
3,628,036	-				-1.4
3,628,036	-				-1.3
3,628,041	-				-2.6
3,628,055	+				+1.5
3,628,056	-				-1.0
3,628,056	-				-1.0
3,628,060	-				+0.0
3,628,174	-	espF	JDDGAC_19075	0.22	-1.3
3,628,191	+	espF	JDDGAC_19075	0.25	-0.1
3,628,359	+	espF	JDDGAC_19075	0.47	+0.4
3,628,359	+	espF	JDDGAC_19075	0.47	-0.9
3,628,709	+				-2.6
3,628,709	+				+1.4
3,628,709	+				-1.5
3,628,722	-				+1.5
3,628,799	+				-2.5
3,628,799	+				+0.3
3,628,799	+				+1.1
3,628,800	-				+0.2
3,628,802	+				-0.4
3,628,838	+				+1.0
3,628,894	+				-1.7