Strain Fitness in Escherichia coli ECRC98 around JDDGAC_08005

Experiment: GB_JK32

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	GB_JK32
1,385,564	+	fimB	JDDGAC_08000	0.54	-1.7
1,385,596	+	fimB	JDDGAC_08000	0.56	-0.4
1,385,596	+	fimB	JDDGAC_08000	0.56	-1.3
1,385,597	-	fimB	JDDGAC_08000	0.56	-1.0
1,385,756	+	fimB	JDDGAC_08000	0.70	-0.1
1,385,756	+	fimB	JDDGAC_08000	0.70	+2.8
1,385,798	+	fimB	JDDGAC_08000	0.73	-0.7
1,385,962	+	fimB	JDDGAC_08000	0.87	-1.7
1,385,962	+	fimB	JDDGAC_08000	0.87	+0.2
1,385,963	-	fimB	JDDGAC_08000	0.87	-0.1
1,385,992	-	fimB	JDDGAC_08000	0.89	+0.4
1,386,049	+				+3.7
1,386,144	+				-0.1
1,386,186	+				-0.7
1,386,455	-				-0.8
1,386,461	-				-1.2
1,386,517	-				-1.1
1,386,582	-				+1.2
1,386,595	-	ycdU	JDDGAC_08005	0.11	-2.3
1,386,946	+	ycdU	JDDGAC_08005	0.46	+0.6
1,387,075	+	ycdU	JDDGAC_08005	0.59	-2.0
1,387,092	-	ycdU	JDDGAC_08005	0.61	+0.2
1,387,137	-	ycdU	JDDGAC_08005	0.66	-1.3
1,387,494	+				-0.4
1,387,655	-	ymdE	JDDGAC_08010	0.20	+1.5
1,387,929	+	ymdE	JDDGAC_08010	0.49	-0.9
1,387,930	-	ymdE	JDDGAC_08010	0.49	+1.5
1,387,930	-	ymdE	JDDGAC_08010	0.49	-2.0
1,388,014	-	ymdE	JDDGAC_08010	0.58	-0.6
1,388,014	-	ymdE	JDDGAC_08010	0.58	-0.3
1,388,068	+	ymdE	JDDGAC_08010	0.63	+2.3
1,388,188	+	ymdE	JDDGAC_08010	0.76	-0.6
1,388,189	-	ymdE	JDDGAC_08010	0.76	-1.1
1,388,193	+	ymdE	JDDGAC_08010	0.77	+1.0
1,388,194	-	ymdE	JDDGAC_08010	0.77	-1.5
1,388,194	-	ymdE	JDDGAC_08010	0.77	-1.0
1,388,194	-	ymdE	JDDGAC_08010	0.77	+2.7
1,388,307	+	ymdE	JDDGAC_08010	0.89	-1.2
1,388,308	-	ymdE	JDDGAC_08010	0.89	+1.4
1,388,387	-				-0.6
1,388,387	-				-1.2
1,388,429	+				-1.1
1,388,430	-				-2.7
1,388,430	-				-3.2
1,388,430	-				-0.2
1,388,440	+				-1.3
1,388,441	-				-1.5
1,388,452	-				-2.7