Strain Fitness in Escherichia coli ECRC98 around JDDGAC_02195

Experiment: GB_JK32

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	GB_JK32
393,039	-	hdhA	JDDGAC_02190	0.20	-0.1
393,552	+	hdhA	JDDGAC_02190	0.87	+1.9
393,652	+				-0.1
393,678	+				+1.3
393,679	-				-0.9
393,766	+				+0.8
393,784	-				+2.3
393,868	+				-1.5
393,868	+				-0.6
393,868	+				+2.0
393,868	+				+0.6
393,993	+	uidR	JDDGAC_02195	0.17	-0.4
394,135	+	uidR	JDDGAC_02195	0.42	+0.2
394,369	+	uidR	JDDGAC_02195	0.82	-1.9
394,370	-	uidR	JDDGAC_02195	0.83	+1.0
394,370	-	uidR	JDDGAC_02195	0.83	+1.2
394,376	+	uidR	JDDGAC_02195	0.84	-0.7
394,681	-				-1.0
394,690	+				+1.0
394,690	+				-2.3
394,691	-				-1.2
395,043	+	lacZ	JDDGAC_02200	0.25	+2.8
395,247	+	lacZ	JDDGAC_02200	0.54	+0.0
395,451	+	lacZ	JDDGAC_02200	0.83	-0.7