Experiment: L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABI39_RS01105 and ABI39_RS01110 are separated by 165 nucleotides ABI39_RS01110 and ABI39_RS01115 are separated by 514 nucleotides
ABI39_RS01105: ABI39_RS01105 - cation:proton antiporter, at 350,100 to 352,247
_RS01105
ABI39_RS01110: ABI39_RS01110 - aspartate-semialdehyde dehydrogenase, at 352,413 to 353,423
_RS01110
ABI39_RS01115: ABI39_RS01115 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 353,938 to 354,576
_RS01115
Position (kb) 352
353
354 Strain fitness (log2 ratio) -1
0
1 at 351.475 kb on - strand, within ABI39_RS01105 at 351.478 kb on - strand, within ABI39_RS01105 at 351.627 kb on + strand, within ABI39_RS01105 at 351.639 kb on - strand, within ABI39_RS01105 at 351.710 kb on - strand, within ABI39_RS01105 at 351.710 kb on - strand, within ABI39_RS01105 at 351.745 kb on - strand, within ABI39_RS01105 at 351.827 kb on - strand, within ABI39_RS01105 at 351.851 kb on - strand, within ABI39_RS01105 at 352.020 kb on - strand, within ABI39_RS01105 at 352.020 kb on - strand, within ABI39_RS01105 at 352.028 kb on - strand, within ABI39_RS01105 at 352.114 kb on - strand at 352.179 kb on - strand at 352.271 kb on - strand at 352.312 kb on + strand at 353.547 kb on + strand at 353.596 kb on + strand at 353.656 kb on + strand at 353.657 kb on - strand at 353.660 kb on - strand at 353.692 kb on - strand at 353.710 kb on - strand at 353.719 kb on + strand at 353.765 kb on + strand at 353.865 kb on + strand at 353.931 kb on + strand at 353.932 kb on - strand at 353.954 kb on - strand at 354.017 kb on - strand, within ABI39_RS01115 at 354.049 kb on + strand, within ABI39_RS01115 at 354.081 kb on + strand, within ABI39_RS01115 at 354.084 kb on - strand, within ABI39_RS01115 at 354.111 kb on + strand, within ABI39_RS01115 at 354.111 kb on + strand, within ABI39_RS01115 at 354.330 kb on + strand, within ABI39_RS01115 at 354.377 kb on + strand, within ABI39_RS01115
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen remove 351,475 - ABI39_RS01105 0.64 +1.1 351,478 - ABI39_RS01105 0.64 +0.4 351,627 + ABI39_RS01105 0.71 -0.6 351,639 - ABI39_RS01105 0.72 -1.1 351,710 - ABI39_RS01105 0.75 -1.7 351,710 - ABI39_RS01105 0.75 +0.0 351,745 - ABI39_RS01105 0.77 +0.5 351,827 - ABI39_RS01105 0.80 -1.0 351,851 - ABI39_RS01105 0.82 -1.1 352,020 - ABI39_RS01105 0.89 -0.2 352,020 - ABI39_RS01105 0.89 -0.4 352,028 - ABI39_RS01105 0.90 -0.5 352,114 - -0.1 352,179 - -0.3 352,271 - -0.2 352,312 + -0.9 353,547 + -0.5 353,596 + -0.7 353,656 + +0.4 353,657 - +0.3 353,660 - -0.2 353,692 - +0.5 353,710 - +0.2 353,719 + -0.3 353,765 + -0.2 353,865 + -0.1 353,931 + -0.1 353,932 - +0.6 353,954 - +0.2 354,017 - ABI39_RS01115 0.12 +1.1 354,049 + ABI39_RS01115 0.17 -1.0 354,081 + ABI39_RS01115 0.22 +0.3 354,084 - ABI39_RS01115 0.23 -0.4 354,111 + ABI39_RS01115 0.27 -0.7 354,111 + ABI39_RS01115 0.27 +0.8 354,330 + ABI39_RS01115 0.61 -0.2 354,377 + ABI39_RS01115 0.69 +0.0
Or see this region's nucleotide sequence