Strain Fitness in Escherichia coli ECOR27 around NOLOHH_23245

Experiment: Bas38

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas38
4,565,975	+	tolB	NOLOHH_23240	0.37	-0.4
4,565,976	-	tolB	NOLOHH_23240	0.37	+0.4
4,565,976	-	tolB	NOLOHH_23240	0.37	-0.4
4,566,140	+	tolB	NOLOHH_23240	0.50	-0.4
4,566,140	+	tolB	NOLOHH_23240	0.50	+0.7
4,566,141	-	tolB	NOLOHH_23240	0.50	+1.1
4,566,227	+	tolB	NOLOHH_23240	0.57	-0.0
4,566,289	-	tolB	NOLOHH_23240	0.61	-1.1
4,566,294	+	tolB	NOLOHH_23240	0.62	-0.6
4,566,403	+	tolB	NOLOHH_23240	0.70	-1.4
4,566,404	-	tolB	NOLOHH_23240	0.70	-0.0
4,566,404	-	tolB	NOLOHH_23240	0.70	-0.2
4,566,441	-	tolB	NOLOHH_23240	0.73	-0.6
4,566,452	+	tolB	NOLOHH_23240	0.74	-0.1
4,566,453	-	tolB	NOLOHH_23240	0.74	+0.2
4,566,453	-	tolB	NOLOHH_23240	0.74	-1.7
4,566,453	-	tolB	NOLOHH_23240	0.74	-0.7
4,566,453	-	tolB	NOLOHH_23240	0.74	-0.3
4,566,453	-	tolB	NOLOHH_23240	0.74	-1.7
4,566,491	-	tolB	NOLOHH_23240	0.77	+0.0
4,566,491	-	tolB	NOLOHH_23240	0.77	-1.2
4,566,491	-	tolB	NOLOHH_23240	0.77	-0.7
4,566,530	-	tolB	NOLOHH_23240	0.80	-1.0
4,566,679	-				-1.7
4,566,767	-				-0.4
4,566,789	+				+1.3
4,566,789	+				+0.0
4,566,789	+				-0.3
4,566,790	-				-1.0
4,566,790	-				-0.4
4,566,790	-				+0.8
4,566,790	-				+0.4
4,566,959	+				-0.0
4,566,959	+				-0.8
4,566,960	-				-2.0
4,566,960	-				+1.0
4,566,961	+				-0.6
4,566,961	+				-0.2
4,566,962	-				-0.2
4,567,000	-				-0.4
4,567,066	-	tolA	NOLOHH_23245	0.12	+0.3
4,567,128	-	tolA	NOLOHH_23245	0.17	+0.0
4,567,128	-	tolA	NOLOHH_23245	0.17	-0.3
4,567,128	-	tolA	NOLOHH_23245	0.17	-1.6
4,567,135	-	tolA	NOLOHH_23245	0.18	-2.2
4,567,167	-	tolA	NOLOHH_23245	0.20	-0.8
4,567,167	-	tolA	NOLOHH_23245	0.20	-0.7
4,567,167	-	tolA	NOLOHH_23245	0.20	-2.1
4,567,167	-	tolA	NOLOHH_23245	0.20	-0.1
4,567,170	+	tolA	NOLOHH_23245	0.20	-2.3
4,567,170	+	tolA	NOLOHH_23245	0.20	-0.4
4,567,171	-	tolA	NOLOHH_23245	0.20	+0.2
4,567,171	-	tolA	NOLOHH_23245	0.20	+1.4
4,567,171	-	tolA	NOLOHH_23245	0.20	-0.3
4,567,283	-	tolA	NOLOHH_23245	0.30	-0.7
4,567,283	-	tolA	NOLOHH_23245	0.30	-2.3
4,567,283	-	tolA	NOLOHH_23245	0.30	-1.0
4,567,962	-	tolA	NOLOHH_23245	0.85	-1.1
4,567,973	-	tolA	NOLOHH_23245	0.85	-2.6
4,568,039	-				+2.0
4,568,039	-				-1.4
4,568,039	-				-1.0
4,568,039	-				-1.6
4,568,041	-				-1.6
4,568,041	-				-0.7
4,568,077	+				-0.2
4,568,104	-				-1.1
4,568,104	-				+1.6
4,568,104	-				-0.2
4,568,218	-				+0.3
4,568,218	-				-1.1
4,568,221	+				-0.3
4,568,261	-	tolR	NOLOHH_23250	0.10	-1.6
4,568,261	-	tolR	NOLOHH_23250	0.10	-0.7
4,568,261	-	tolR	NOLOHH_23250	0.10	-1.2
4,568,265	-	tolR	NOLOHH_23250	0.11	+0.2
4,568,296	-	tolR	NOLOHH_23250	0.19	-0.9
4,568,425	-	tolR	NOLOHH_23250	0.49	-0.1
4,568,435	-	tolR	NOLOHH_23250	0.51	+0.5
4,568,574	-	tolR	NOLOHH_23250	0.83	-2.4
4,568,588	+	tolR	NOLOHH_23250	0.87	+1.0
4,568,724	+	tolQ	NOLOHH_23255	0.11	+1.0
4,568,765	-	tolQ	NOLOHH_23255	0.17	-0.4
4,568,766	+	tolQ	NOLOHH_23255	0.17	+1.0
4,569,002	-	tolQ	NOLOHH_23255	0.51	-0.5