Experiment: Bas38
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ulaG and ulaR are separated by 107 nucleotides ulaR and yjfP overlap by 4 nucleotides yjfP and bsmA are separated by 181 nucleotides
NOLOHH_04415: ulaG - L-ascorbate 6-phosphate lactonase, at 799,271 to 800,335
ulaG
NOLOHH_04420: ulaR - HTH-type transcriptional regulator UlaR, at 800,443 to 801,198
ulaR
NOLOHH_04425: yjfP - esterase, at 801,195 to 801,944
yjfP
NOLOHH_04430: bsmA - biofilm peroxide resistance protein BsmA, at 802,126 to 802,455
bsmA
Position (kb) 800
801
802 Strain fitness (log2 ratio) -2
-1
0
1
2 at 799.554 kb on + strand, within ulaG at 799.554 kb on + strand, within ulaG at 799.554 kb on + strand, within ulaG at 799.555 kb on - strand, within ulaG at 799.637 kb on - strand, within ulaG at 799.686 kb on + strand, within ulaG at 799.686 kb on + strand, within ulaG at 799.686 kb on + strand, within ulaG at 799.687 kb on - strand, within ulaG at 799.687 kb on - strand, within ulaG at 799.687 kb on - strand, within ulaG at 799.687 kb on - strand, within ulaG at 799.687 kb on - strand, within ulaG at 799.687 kb on - strand, within ulaG at 799.779 kb on + strand, within ulaG at 799.904 kb on + strand, within ulaG at 799.905 kb on - strand, within ulaG at 799.960 kb on + strand, within ulaG at 799.960 kb on + strand, within ulaG at 799.960 kb on + strand, within ulaG at 799.961 kb on - strand, within ulaG at 799.964 kb on + strand, within ulaG at 799.964 kb on + strand, within ulaG at 799.964 kb on + strand, within ulaG at 799.964 kb on + strand, within ulaG at 799.965 kb on - strand, within ulaG at 799.965 kb on - strand, within ulaG at 799.965 kb on - strand, within ulaG at 799.965 kb on - strand, within ulaG at 799.968 kb on - strand, within ulaG at 800.015 kb on + strand, within ulaG at 800.015 kb on + strand, within ulaG at 800.016 kb on - strand, within ulaG at 800.016 kb on - strand, within ulaG at 800.016 kb on - strand, within ulaG at 800.016 kb on - strand, within ulaG at 800.071 kb on + strand, within ulaG at 800.209 kb on + strand, within ulaG at 800.345 kb on + strand at 800.346 kb on - strand at 800.384 kb on - strand at 800.386 kb on + strand at 800.386 kb on + strand at 800.387 kb on - strand at 800.387 kb on - strand at 800.437 kb on + strand at 800.616 kb on + strand, within ulaR at 800.688 kb on + strand, within ulaR at 800.688 kb on + strand, within ulaR at 800.694 kb on + strand, within ulaR at 800.732 kb on + strand, within ulaR at 800.805 kb on + strand, within ulaR at 800.805 kb on + strand, within ulaR at 800.805 kb on + strand, within ulaR at 800.827 kb on + strand, within ulaR at 800.875 kb on + strand, within ulaR at 800.875 kb on + strand, within ulaR at 800.983 kb on + strand, within ulaR at 800.983 kb on + strand, within ulaR at 801.060 kb on + strand, within ulaR at 801.060 kb on + strand, within ulaR at 801.066 kb on + strand, within ulaR at 801.067 kb on - strand, within ulaR at 801.231 kb on + strand at 801.232 kb on - strand at 801.246 kb on - strand at 801.327 kb on + strand, within yjfP at 801.327 kb on + strand, within yjfP at 801.328 kb on - strand, within yjfP at 801.378 kb on + strand, within yjfP at 801.379 kb on - strand, within yjfP at 801.446 kb on + strand, within yjfP at 801.515 kb on + strand, within yjfP at 801.515 kb on + strand, within yjfP at 801.515 kb on + strand, within yjfP at 801.516 kb on - strand, within yjfP at 801.516 kb on - strand, within yjfP at 801.663 kb on + strand, within yjfP at 801.663 kb on + strand, within yjfP at 801.663 kb on + strand, within yjfP at 801.663 kb on + strand, within yjfP at 801.664 kb on - strand, within yjfP at 801.664 kb on - strand, within yjfP at 801.664 kb on - strand, within yjfP at 801.683 kb on + strand, within yjfP at 801.811 kb on + strand, within yjfP at 801.811 kb on + strand, within yjfP at 801.811 kb on + strand, within yjfP at 801.812 kb on - strand, within yjfP at 801.812 kb on - strand, within yjfP at 801.812 kb on - strand, within yjfP at 801.812 kb on - strand, within yjfP at 801.812 kb on - strand, within yjfP at 801.812 kb on - strand, within yjfP at 801.815 kb on + strand, within yjfP at 801.815 kb on + strand, within yjfP at 801.815 kb on + strand, within yjfP at 801.815 kb on + strand, within yjfP at 801.816 kb on - strand, within yjfP at 801.816 kb on - strand, within yjfP at 801.816 kb on - strand, within yjfP at 801.817 kb on + strand, within yjfP at 801.817 kb on + strand, within yjfP at 801.817 kb on + strand, within yjfP at 801.817 kb on + strand, within yjfP at 801.817 kb on + strand, within yjfP at 801.817 kb on + strand, within yjfP at 801.817 kb on + strand, within yjfP at 801.817 kb on + strand, within yjfP at 801.818 kb on - strand, within yjfP at 801.818 kb on - strand, within yjfP at 801.818 kb on - strand, within yjfP at 801.818 kb on - strand, within yjfP at 801.818 kb on - strand, within yjfP at 801.818 kb on - strand, within yjfP at 801.855 kb on + strand, within yjfP at 801.856 kb on - strand, within yjfP at 801.872 kb on + strand at 801.911 kb on + strand at 801.933 kb on + strand at 801.967 kb on - strand at 801.967 kb on - strand at 802.008 kb on - strand at 802.010 kb on + strand at 802.010 kb on + strand at 802.011 kb on - strand at 802.011 kb on - strand at 802.011 kb on - strand at 802.011 kb on - strand at 802.011 kb on - strand at 802.011 kb on - strand at 802.018 kb on - strand at 802.018 kb on - strand at 802.110 kb on - strand at 802.112 kb on + strand at 802.121 kb on - strand at 802.125 kb on + strand at 802.125 kb on + strand at 802.125 kb on + strand at 802.125 kb on + strand at 802.126 kb on - strand at 802.126 kb on - strand at 802.144 kb on - strand at 802.144 kb on - strand at 802.144 kb on - strand at 802.146 kb on + strand at 802.146 kb on + strand at 802.152 kb on + strand at 802.152 kb on + strand at 802.153 kb on - strand at 802.153 kb on - strand at 802.156 kb on + strand at 802.156 kb on + strand at 802.172 kb on + strand, within bsmA at 802.190 kb on + strand, within bsmA at 802.190 kb on + strand, within bsmA at 802.191 kb on - strand, within bsmA at 802.191 kb on - strand, within bsmA
Per-strain Table
Position Strand Gene LocusTag Fraction Bas38 remove 799,554 + ulaG NOLOHH_04415 0.27 +0.1 799,554 + ulaG NOLOHH_04415 0.27 +0.1 799,554 + ulaG NOLOHH_04415 0.27 -0.2 799,555 - ulaG NOLOHH_04415 0.27 +0.8 799,637 - ulaG NOLOHH_04415 0.34 +0.0 799,686 + ulaG NOLOHH_04415 0.39 +0.0 799,686 + ulaG NOLOHH_04415 0.39 -0.7 799,686 + ulaG NOLOHH_04415 0.39 +0.7 799,687 - ulaG NOLOHH_04415 0.39 -0.2 799,687 - ulaG NOLOHH_04415 0.39 -0.7 799,687 - ulaG NOLOHH_04415 0.39 -0.5 799,687 - ulaG NOLOHH_04415 0.39 +0.8 799,687 - ulaG NOLOHH_04415 0.39 +1.9 799,687 - ulaG NOLOHH_04415 0.39 +0.2 799,779 + ulaG NOLOHH_04415 0.48 -0.5 799,904 + ulaG NOLOHH_04415 0.59 +0.2 799,905 - ulaG NOLOHH_04415 0.60 -0.4 799,960 + ulaG NOLOHH_04415 0.65 +0.6 799,960 + ulaG NOLOHH_04415 0.65 +0.2 799,960 + ulaG NOLOHH_04415 0.65 -0.2 799,961 - ulaG NOLOHH_04415 0.65 -1.7 799,964 + ulaG NOLOHH_04415 0.65 -0.2 799,964 + ulaG NOLOHH_04415 0.65 +0.5 799,964 + ulaG NOLOHH_04415 0.65 -0.2 799,964 + ulaG NOLOHH_04415 0.65 -0.2 799,965 - ulaG NOLOHH_04415 0.65 +0.1 799,965 - ulaG NOLOHH_04415 0.65 +0.1 799,965 - ulaG NOLOHH_04415 0.65 +0.0 799,965 - ulaG NOLOHH_04415 0.65 +0.1 799,968 - ulaG NOLOHH_04415 0.65 -0.1 800,015 + ulaG NOLOHH_04415 0.70 -1.8 800,015 + ulaG NOLOHH_04415 0.70 -0.4 800,016 - ulaG NOLOHH_04415 0.70 +0.1 800,016 - ulaG NOLOHH_04415 0.70 -0.2 800,016 - ulaG NOLOHH_04415 0.70 -0.2 800,016 - ulaG NOLOHH_04415 0.70 -0.6 800,071 + ulaG NOLOHH_04415 0.75 -0.6 800,209 + ulaG NOLOHH_04415 0.88 -1.3 800,345 + -0.7 800,346 - -0.7 800,384 - +1.0 800,386 + -0.3 800,386 + +0.7 800,387 - +0.1 800,387 - -0.1 800,437 + -0.6 800,616 + ulaR NOLOHH_04420 0.23 +0.2 800,688 + ulaR NOLOHH_04420 0.32 -0.6 800,688 + ulaR NOLOHH_04420 0.32 -1.1 800,694 + ulaR NOLOHH_04420 0.33 +0.6 800,732 + ulaR NOLOHH_04420 0.38 -1.8 800,805 + ulaR NOLOHH_04420 0.48 +0.7 800,805 + ulaR NOLOHH_04420 0.48 -0.7 800,805 + ulaR NOLOHH_04420 0.48 +0.0 800,827 + ulaR NOLOHH_04420 0.51 -1.5 800,875 + ulaR NOLOHH_04420 0.57 -1.0 800,875 + ulaR NOLOHH_04420 0.57 -0.5 800,983 + ulaR NOLOHH_04420 0.71 -0.9 800,983 + ulaR NOLOHH_04420 0.71 -0.1 801,060 + ulaR NOLOHH_04420 0.82 -2.1 801,060 + ulaR NOLOHH_04420 0.82 -1.2 801,066 + ulaR NOLOHH_04420 0.82 -0.6 801,067 - ulaR NOLOHH_04420 0.83 +0.3 801,231 + +0.5 801,232 - -1.1 801,246 - -0.2 801,327 + yjfP NOLOHH_04425 0.18 +0.8 801,327 + yjfP NOLOHH_04425 0.18 +0.3 801,328 - yjfP NOLOHH_04425 0.18 -0.7 801,378 + yjfP NOLOHH_04425 0.24 +0.7 801,379 - yjfP NOLOHH_04425 0.25 -1.1 801,446 + yjfP NOLOHH_04425 0.33 -0.1 801,515 + yjfP NOLOHH_04425 0.43 +0.4 801,515 + yjfP NOLOHH_04425 0.43 -0.1 801,515 + yjfP NOLOHH_04425 0.43 +0.2 801,516 - yjfP NOLOHH_04425 0.43 -0.1 801,516 - yjfP NOLOHH_04425 0.43 +0.3 801,663 + yjfP NOLOHH_04425 0.62 -0.5 801,663 + yjfP NOLOHH_04425 0.62 -0.2 801,663 + yjfP NOLOHH_04425 0.62 +0.4 801,663 + yjfP NOLOHH_04425 0.62 +0.7 801,664 - yjfP NOLOHH_04425 0.63 -1.6 801,664 - yjfP NOLOHH_04425 0.63 +0.5 801,664 - yjfP NOLOHH_04425 0.63 +0.7 801,683 + yjfP NOLOHH_04425 0.65 +0.2 801,811 + yjfP NOLOHH_04425 0.82 +0.3 801,811 + yjfP NOLOHH_04425 0.82 +0.9 801,811 + yjfP NOLOHH_04425 0.82 +0.2 801,812 - yjfP NOLOHH_04425 0.82 +0.3 801,812 - yjfP NOLOHH_04425 0.82 -0.7 801,812 - yjfP NOLOHH_04425 0.82 +0.2 801,812 - yjfP NOLOHH_04425 0.82 -0.2 801,812 - yjfP NOLOHH_04425 0.82 +0.1 801,812 - yjfP NOLOHH_04425 0.82 -0.1 801,815 + yjfP NOLOHH_04425 0.83 -0.3 801,815 + yjfP NOLOHH_04425 0.83 +0.2 801,815 + yjfP NOLOHH_04425 0.83 +0.7 801,815 + yjfP NOLOHH_04425 0.83 -0.1 801,816 - yjfP NOLOHH_04425 0.83 -0.9 801,816 - yjfP NOLOHH_04425 0.83 +0.8 801,816 - yjfP NOLOHH_04425 0.83 +0.6 801,817 + yjfP NOLOHH_04425 0.83 +0.3 801,817 + yjfP NOLOHH_04425 0.83 -0.5 801,817 + yjfP NOLOHH_04425 0.83 -0.5 801,817 + yjfP NOLOHH_04425 0.83 -0.5 801,817 + yjfP NOLOHH_04425 0.83 +1.0 801,817 + yjfP NOLOHH_04425 0.83 -0.4 801,817 + yjfP NOLOHH_04425 0.83 -0.2 801,817 + yjfP NOLOHH_04425 0.83 +0.2 801,818 - yjfP NOLOHH_04425 0.83 +1.5 801,818 - yjfP NOLOHH_04425 0.83 +1.3 801,818 - yjfP NOLOHH_04425 0.83 +0.7 801,818 - yjfP NOLOHH_04425 0.83 +0.9 801,818 - yjfP NOLOHH_04425 0.83 -0.0 801,818 - yjfP NOLOHH_04425 0.83 +0.1 801,855 + yjfP NOLOHH_04425 0.88 -0.3 801,856 - yjfP NOLOHH_04425 0.88 -0.9 801,872 + -0.1 801,911 + -0.0 801,933 + +1.3 801,967 - -1.7 801,967 - -1.8 802,008 - -0.0 802,010 + -1.4 802,010 + -0.2 802,011 - +0.3 802,011 - -0.0 802,011 - -0.7 802,011 - -0.1 802,011 - -0.4 802,011 - -0.6 802,018 - -1.7 802,018 - -0.9 802,110 - +0.8 802,112 + -0.1 802,121 - +0.3 802,125 + +0.2 802,125 + -0.3 802,125 + +0.2 802,125 + +0.1 802,126 - -0.3 802,126 - +0.5 802,144 - -0.7 802,144 - +0.9 802,144 - +0.4 802,146 + +0.8 802,146 + +0.1 802,152 + +0.1 802,152 + -0.0 802,153 - +0.9 802,153 - -0.0 802,156 + +0.2 802,156 + +0.1 802,172 + bsmA NOLOHH_04430 0.14 -0.2 802,190 + bsmA NOLOHH_04430 0.19 -1.0 802,190 + bsmA NOLOHH_04430 0.19 -0.2 802,191 - bsmA NOLOHH_04430 0.20 -0.2 802,191 - bsmA NOLOHH_04430 0.20 +0.4
Or see this region's nucleotide sequence