Strain Fitness in Escherichia coli ECOR27 around NOLOHH_02485

Experiment: Bas38

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntdnaE and rnhB are separated by 36 nucleotidesrnhB and lpxB overlap by 4 nucleotides NOLOHH_02480: dnaE - DNA polymerase III subunit alpha, at 401,781 to 405,263 dnaE NOLOHH_02485: rnhB - ribonuclease HII, at 405,300 to 405,896 rnhB NOLOHH_02490: lpxB - lipid-A-disaccharide synthase, at 405,893 to 407,041 lpxB Position (kb) 405 406Strain fitness (log2 ratio) -1 0 1at 405.428 kb on - strand, within rnhBat 405.600 kb on - strand, within rnhBat 405.600 kb on - strand, within rnhB

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas38
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405,428 - rnhB NOLOHH_02485 0.21 -0.8
405,600 - rnhB NOLOHH_02485 0.50 -0.4
405,600 - rnhB NOLOHH_02485 0.50 -0.9

Or see this region's nucleotide sequence