Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS04365

Experiment: L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABI39_RS04355 and ABI39_RS04360 overlap by 4 nucleotidesABI39_RS04360 and ABI39_RS04365 are separated by 3 nucleotidesABI39_RS04365 and ABI39_RS04370 are separated by 37 nucleotides ABI39_RS04355: ABI39_RS04355 - UDP-N-acetylmuramate--L-alanine ligase, at 1,221,622 to 1,222,998 _RS04355 ABI39_RS04360: ABI39_RS04360 - hypothetical protein, at 1,222,995 to 1,223,732 _RS04360 ABI39_RS04365: ABI39_RS04365 - cell division protein FtsA, at 1,223,736 to 1,225,247 _RS04365 ABI39_RS04370: ABI39_RS04370 - cell division protein FtsZ, at 1,225,285 to 1,226,589 _RS04370 Position (kb) 1223 1224 1225 1226Strain fitness (log2 ratio) -1 0 1at 1222.964 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen
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1,222,964 + -0.2

Or see this region's nucleotide sequence