Experiment: L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABI39_RS02090 and ABI39_RS02095 are separated by 1 nucleotides ABI39_RS02095 and ABI39_RS02100 are separated by 266 nucleotides ABI39_RS02100 and ABI39_RS02105 are separated by 12 nucleotides
ABI39_RS02090: ABI39_RS02090 - DUF362 domain-containing protein, at 614,991 to 615,968
_RS02090
ABI39_RS02095: ABI39_RS02095 - ECF transporter S component, at 615,970 to 616,249
_RS02095
ABI39_RS02100: ABI39_RS02100 - peptidylprolyl isomerase, at 616,516 to 617,361
_RS02100
ABI39_RS02105: ABI39_RS02105 - insulinase family protein, at 617,374 to 618,618
_RS02105
Position (kb) 616
617
618 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 615.903 kb on - strand at 615.987 kb on + strand at 616.361 kb on - strand at 616.402 kb on + strand at 616.403 kb on - strand at 616.417 kb on + strand at 616.446 kb on + strand at 616.727 kb on + strand, within ABI39_RS02100 at 616.727 kb on + strand, within ABI39_RS02100 at 616.729 kb on + strand, within ABI39_RS02100 at 616.737 kb on + strand, within ABI39_RS02100 at 616.840 kb on + strand, within ABI39_RS02100 at 616.955 kb on - strand, within ABI39_RS02100 at 617.048 kb on + strand, within ABI39_RS02100 at 617.074 kb on + strand, within ABI39_RS02100 at 617.074 kb on + strand, within ABI39_RS02100 at 617.239 kb on + strand, within ABI39_RS02100 at 617.240 kb on - strand, within ABI39_RS02100 at 617.325 kb on - strand at 617.437 kb on - strand at 617.613 kb on + strand, within ABI39_RS02105 at 617.688 kb on + strand, within ABI39_RS02105 at 617.689 kb on - strand, within ABI39_RS02105 at 617.689 kb on - strand, within ABI39_RS02105 at 617.815 kb on + strand, within ABI39_RS02105 at 617.817 kb on + strand, within ABI39_RS02105 at 617.818 kb on - strand, within ABI39_RS02105 at 617.908 kb on - strand, within ABI39_RS02105 at 617.914 kb on + strand, within ABI39_RS02105 at 617.955 kb on + strand, within ABI39_RS02105 at 618.143 kb on - strand, within ABI39_RS02105 at 618.249 kb on + strand, within ABI39_RS02105
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen remove 615,903 - -1.3 615,987 + +2.1 616,361 - -0.1 616,402 + +0.4 616,403 - -1.2 616,417 + +0.7 616,446 + -1.4 616,727 + ABI39_RS02100 0.25 +2.1 616,727 + ABI39_RS02100 0.25 +2.5 616,729 + ABI39_RS02100 0.25 +1.9 616,737 + ABI39_RS02100 0.26 +2.4 616,840 + ABI39_RS02100 0.38 +2.3 616,955 - ABI39_RS02100 0.52 +4.0 617,048 + ABI39_RS02100 0.63 +1.5 617,074 + ABI39_RS02100 0.66 +0.7 617,074 + ABI39_RS02100 0.66 -0.5 617,239 + ABI39_RS02100 0.85 +0.1 617,240 - ABI39_RS02100 0.86 +2.9 617,325 - +3.5 617,437 - +3.4 617,613 + ABI39_RS02105 0.19 +2.6 617,688 + ABI39_RS02105 0.25 +3.3 617,689 - ABI39_RS02105 0.25 +3.0 617,689 - ABI39_RS02105 0.25 +3.4 617,815 + ABI39_RS02105 0.35 +2.9 617,817 + ABI39_RS02105 0.36 +2.8 617,818 - ABI39_RS02105 0.36 +3.6 617,908 - ABI39_RS02105 0.43 +3.7 617,914 + ABI39_RS02105 0.43 +2.5 617,955 + ABI39_RS02105 0.47 +3.3 618,143 - ABI39_RS02105 0.62 +4.6 618,249 + ABI39_RS02105 0.70 +3.5
Or see this region's nucleotide sequence