Experiment: L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABI39_RS01995 and ABI39_RS02000 are separated by 11 nucleotides ABI39_RS02000 and ABI39_RS02005 are separated by 121 nucleotides
ABI39_RS01995: ABI39_RS01995 - DeoR/GlpR transcriptional regulator, at 584,008 to 584,763
_RS01995
ABI39_RS02000: ABI39_RS02000 - 3,4-dihydroxy-2-butanone-4-phosphate synthase, at 584,775 to 585,389
_RS02000
ABI39_RS02005: ABI39_RS02005 - DUF5060 domain-containing protein, at 585,511 to 587,115
_RS02005
Position (kb) 584
585
586 Strain fitness (log2 ratio) -2
-1
0
1
2 at 583.789 kb on - strand at 583.828 kb on + strand at 583.829 kb on - strand at 583.834 kb on + strand at 583.835 kb on - strand at 583.843 kb on - strand at 583.886 kb on - strand at 584.061 kb on + strand at 584.128 kb on + strand, within ABI39_RS01995 at 584.204 kb on - strand, within ABI39_RS01995 at 584.423 kb on + strand, within ABI39_RS01995 at 584.943 kb on - strand, within ABI39_RS02000 at 585.067 kb on - strand, within ABI39_RS02000 at 585.121 kb on - strand, within ABI39_RS02000 at 585.127 kb on - strand, within ABI39_RS02000 at 585.135 kb on - strand, within ABI39_RS02000 at 585.151 kb on - strand, within ABI39_RS02000 at 585.225 kb on + strand, within ABI39_RS02000 at 585.226 kb on - strand, within ABI39_RS02000 at 585.409 kb on + strand at 585.410 kb on - strand at 585.543 kb on - strand at 585.577 kb on + strand at 585.578 kb on - strand at 585.771 kb on - strand, within ABI39_RS02005 at 585.771 kb on - strand, within ABI39_RS02005 at 585.789 kb on + strand, within ABI39_RS02005 at 585.814 kb on - strand, within ABI39_RS02005 at 585.988 kb on - strand, within ABI39_RS02005 at 585.993 kb on - strand, within ABI39_RS02005 at 586.064 kb on - strand, within ABI39_RS02005 at 586.300 kb on - strand, within ABI39_RS02005 at 586.338 kb on + strand, within ABI39_RS02005 at 586.353 kb on - strand, within ABI39_RS02005 at 586.358 kb on - strand, within ABI39_RS02005
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen remove 583,789 - +1.7 583,828 + +0.8 583,829 - +1.9 583,834 + -0.5 583,835 - +1.1 583,843 - -0.5 583,886 - +1.9 584,061 + +0.8 584,128 + ABI39_RS01995 0.16 -0.4 584,204 - ABI39_RS01995 0.26 -1.7 584,423 + ABI39_RS01995 0.55 +0.8 584,943 - ABI39_RS02000 0.27 -2.1 585,067 - ABI39_RS02000 0.47 -1.3 585,121 - ABI39_RS02000 0.56 -0.3 585,127 - ABI39_RS02000 0.57 +1.1 585,135 - ABI39_RS02000 0.59 -0.6 585,151 - ABI39_RS02000 0.61 -1.1 585,225 + ABI39_RS02000 0.73 +1.4 585,226 - ABI39_RS02000 0.73 -0.8 585,409 + +2.4 585,410 - +0.3 585,543 - +0.4 585,577 + +1.0 585,578 - +0.2 585,771 - ABI39_RS02005 0.16 +1.4 585,771 - ABI39_RS02005 0.16 +0.0 585,789 + ABI39_RS02005 0.17 +0.7 585,814 - ABI39_RS02005 0.19 +0.5 585,988 - ABI39_RS02005 0.30 -1.7 585,993 - ABI39_RS02005 0.30 +0.8 586,064 - ABI39_RS02005 0.34 -0.1 586,300 - ABI39_RS02005 0.49 +0.0 586,338 + ABI39_RS02005 0.52 +1.7 586,353 - ABI39_RS02005 0.52 -0.2 586,358 - ABI39_RS02005 0.53 +0.6
Or see this region's nucleotide sequence