Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS10555

Experiment: Beta-Lactose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Beta-Lactose 2.5 mg/ml (C)
2,819,005	-		ABI39_RS10550	0.67	+0.4
2,819,051	-		ABI39_RS10550	0.70	-1.4
2,819,580	-				+1.2
2,819,705	-				+0.7
2,819,723	+				+0.0
2,819,853	-				-0.2
2,819,886	+		ABI39_RS10555	0.12	-1.0
2,819,888	+		ABI39_RS10555	0.12	+0.4
2,819,966	+		ABI39_RS10555	0.19	+0.1
2,819,967	-		ABI39_RS10555	0.19	+0.1
2,820,404	+		ABI39_RS10555	0.55	-1.0
2,820,404	+		ABI39_RS10555	0.55	-0.9
2,820,404	+		ABI39_RS10555	0.55	-0.5
2,820,405	-		ABI39_RS10555	0.55	-0.5
2,820,405	-		ABI39_RS10555	0.55	+0.5
2,820,439	+		ABI39_RS10555	0.58	-0.2
2,820,456	+		ABI39_RS10555	0.59	-1.7
2,820,503	-		ABI39_RS10555	0.63	+0.4
2,820,542	-		ABI39_RS10555	0.66	-0.5
2,820,573	+		ABI39_RS10555	0.69	-0.2
2,820,624	-		ABI39_RS10555	0.73	-0.5
2,820,693	-		ABI39_RS10555	0.79	-1.2
2,820,710	+		ABI39_RS10555	0.80	-1.1
2,820,841	+				-0.1
2,820,847	-				-0.1
2,820,976	+				-0.9
2,820,994	+				+0.2
2,821,185	+		ABI39_RS10560	0.15	-1.4
2,821,292	+		ABI39_RS10560	0.22	+0.2
2,821,342	+		ABI39_RS10560	0.26	+0.7
2,821,430	+		ABI39_RS10560	0.32	-0.8
2,821,461	-		ABI39_RS10560	0.35	-0.5
2,821,466	+		ABI39_RS10560	0.35	-1.5
2,821,477	-		ABI39_RS10560	0.36	-0.8
2,821,531	+		ABI39_RS10560	0.40	-0.7
2,821,531	+		ABI39_RS10560	0.40	-0.3
2,821,537	-		ABI39_RS10560	0.40	+0.6
2,821,577	+		ABI39_RS10560	0.43	-1.8
2,821,661	-		ABI39_RS10560	0.49	-0.6
2,821,771	-		ABI39_RS10560	0.57	-0.7
2,821,834	+		ABI39_RS10560	0.61	-0.3
2,821,835	-		ABI39_RS10560	0.61	-1.0
2,821,921	-		ABI39_RS10560	0.68	+0.4