Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS08670

Experiment: Beta-Lactose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Beta-Lactose 2.5 mg/ml (C)
2,317,453	+		ABI39_RS21935	0.20	+0.3
2,317,493	+		ABI39_RS21935	0.34	+0.7
2,317,558	+		ABI39_RS21935	0.57	-0.5
2,317,651	+		ABI39_RS21935	0.89	+0.9
2,317,677	+				-0.2
2,317,678	-				+0.9
2,317,693	-				+0.1
2,317,697	+				+0.6
2,317,698	-				-0.2
2,317,698	-				-0.3
2,317,698	-				+0.1
2,317,699	+				-0.7
2,317,744	-				-0.4
2,317,796	-				-0.5
2,317,832	+				-1.1
2,317,833	-				-0.1
2,317,833	-				-1.2
2,317,836	+		ABI39_RS08670	0.10	+0.4
2,317,836	+		ABI39_RS08670	0.10	+0.6
2,317,836	+		ABI39_RS08670	0.10	-1.0
2,317,838	+		ABI39_RS08670	0.11	+0.4
2,317,845	+		ABI39_RS08670	0.12	+5.0
2,317,851	-		ABI39_RS08670	0.13	+0.3
2,317,974	-		ABI39_RS08670	0.34	-0.3
2,318,020	-		ABI39_RS08670	0.41	+0.7
2,318,265	-		ABI39_RS08670	0.83	-0.2
2,318,287	+		ABI39_RS08670	0.87	+0.3
2,318,288	-		ABI39_RS08670	0.87	+0.8
2,318,355	+				+0.5
2,318,359	-				-0.4
2,318,361	+				-0.5
2,318,417	-				+0.2
2,318,442	-				-0.5
2,318,466	+				-0.3
2,318,587	+		ABI39_RS08675	0.11	-0.7
2,318,589	+		ABI39_RS08675	0.11	+0.8
2,318,692	-		ABI39_RS08675	0.22	+0.5
2,318,739	+		ABI39_RS08675	0.27	+0.3
2,318,798	-		ABI39_RS08675	0.33	+0.1
2,319,223	-		ABI39_RS08675	0.78	+0.7
2,319,242	+		ABI39_RS08675	0.80	+0.2
2,319,259	+		ABI39_RS08675	0.82	+0.4
2,319,260	-		ABI39_RS08675	0.82	+1.0
2,319,260	-		ABI39_RS08675	0.82	+0.4
2,319,285	+		ABI39_RS08675	0.85	+0.7