Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS18150

Experiment: Beta-Lactose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Beta-Lactose 2.5 mg/ml (C)
4,578,635	+		ABI39_RS18145	0.36	+1.1
4,578,646	+		ABI39_RS18145	0.37	+0.6
4,578,646	+		ABI39_RS18145	0.37	+1.5
4,578,650	+		ABI39_RS18145	0.37	+1.7
4,578,688	+		ABI39_RS18145	0.40	+0.5
4,578,754	+		ABI39_RS18145	0.44	+0.5
4,578,904	-		ABI39_RS18145	0.54	+1.3
4,578,958	+		ABI39_RS18145	0.57	-0.7
4,578,961	+		ABI39_RS18145	0.58	+0.3
4,578,973	+		ABI39_RS18145	0.58	+0.3
4,579,043	+		ABI39_RS18145	0.63	+1.5
4,579,044	-		ABI39_RS18145	0.63	+2.0
4,579,048	-		ABI39_RS18145	0.63	+0.5
4,579,118	-		ABI39_RS18145	0.68	+1.4
4,579,148	-		ABI39_RS18145	0.70	+1.5
4,579,211	-		ABI39_RS18145	0.74	+0.3
4,579,214	+		ABI39_RS18145	0.74	-0.1
4,579,215	-		ABI39_RS18145	0.74	+3.1
4,579,315	+		ABI39_RS18145	0.81	+1.6
4,579,316	-		ABI39_RS18145	0.81	+0.8
4,579,319	+		ABI39_RS18145	0.81	+2.7
4,579,319	+		ABI39_RS18145	0.81	+0.9
4,579,320	-		ABI39_RS18145	0.81	+1.9
4,579,361	-		ABI39_RS18145	0.84	+0.1
4,579,382	-		ABI39_RS18145	0.85	+0.4
4,579,561	+				+0.7
4,579,610	-				+1.0
4,579,718	+		ABI39_RS18150	0.15	+1.0
4,579,719	-		ABI39_RS18150	0.15	+0.6
4,579,795	-		ABI39_RS18150	0.26	-0.4
4,579,795	-		ABI39_RS18150	0.26	+0.7
4,579,825	+		ABI39_RS18150	0.30	-0.1
4,579,826	-		ABI39_RS18150	0.30	-0.1
4,580,023	-		ABI39_RS18150	0.58	+0.2
4,580,182	+		ABI39_RS18150	0.81	+0.0
4,580,183	-		ABI39_RS18150	0.81	+0.7
4,580,290	-				-0.6
4,580,316	-				+0.5
4,580,316	-				-0.2
4,580,316	-				+0.6
4,580,338	-				-0.4
4,580,341	+				+1.5
4,580,349	+				+0.5
4,580,349	+				+0.3
4,580,355	-				-0.1
4,580,383	-				+0.3
4,580,414	-		ABI39_RS18155	0.13	+0.2
4,580,427	+		ABI39_RS18155	0.15	+0.8
4,580,428	-		ABI39_RS18155	0.15	-1.8
4,580,428	-		ABI39_RS18155	0.15	+0.0
4,580,540	+		ABI39_RS18155	0.35	+0.7
4,580,648	-		ABI39_RS18155	0.54	-1.6
4,580,666	+		ABI39_RS18155	0.57	+0.6
4,580,667	-		ABI39_RS18155	0.57	+1.8
4,580,668	+		ABI39_RS18155	0.57	+0.3
4,580,669	-		ABI39_RS18155	0.57	-0.5
4,580,669	-		ABI39_RS18155	0.57	+0.4
4,580,669	-		ABI39_RS18155	0.57	-0.5
4,580,750	+		ABI39_RS18155	0.72	+0.5
4,580,753	-		ABI39_RS18155	0.72	-1.3
4,580,753	-		ABI39_RS18155	0.72	-0.7
4,580,802	-		ABI39_RS18155	0.81	-0.4
4,580,848	+		ABI39_RS18155	0.89	+0.5
4,580,880	-				+0.3
4,580,886	+				+0.7
4,580,899	-				-1.6
4,580,928	-				-0.0
4,580,991	+				-0.4
4,580,991	+				-0.1
4,581,113	-		ABI39_RS18160	0.11	+0.3
4,581,202	+		ABI39_RS18160	0.18	+0.2