Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS18140

Experiment: Beta-Lactose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Beta-Lactose 2.5 mg/ml (C)
4,576,501	+		ABI39_RS18135	0.22	+2.3
4,576,524	+		ABI39_RS18135	0.24	+0.9
4,576,530	+		ABI39_RS18135	0.24	+1.5
4,576,546	+		ABI39_RS18135	0.26	+0.8
4,576,736	-		ABI39_RS18135	0.41	+0.8
4,576,797	+		ABI39_RS18135	0.47	+2.0
4,576,891	+		ABI39_RS18135	0.54	+1.8
4,576,966	-		ABI39_RS18135	0.61	+0.9
4,576,999	-		ABI39_RS18135	0.63	+0.0
4,577,136	+		ABI39_RS18135	0.75	+0.5
4,577,248	-		ABI39_RS18135	0.84	+1.4
4,577,266	+		ABI39_RS18135	0.86	+1.4
4,577,267	-		ABI39_RS18135	0.86	+0.0
4,577,328	-				+1.4
4,577,544	-		ABI39_RS18140	0.17	+2.2
4,577,899	+		ABI39_RS18140	0.72	+3.3
4,577,900	-		ABI39_RS18140	0.72	+1.5
4,577,918	-		ABI39_RS18140	0.75	+1.4
4,577,918	-		ABI39_RS18140	0.75	+1.3
4,577,919	+		ABI39_RS18140	0.75	+0.6
4,577,920	-		ABI39_RS18140	0.75	+0.6
4,577,920	-		ABI39_RS18140	0.75	+1.3
4,577,920	-		ABI39_RS18140	0.75	+0.9
4,578,069	+				+0.3
4,578,069	+				-0.2
4,578,071	+				+2.1
4,578,074	+				+0.5
4,578,098	+				+0.3
4,578,110	+				+0.1
4,578,110	+				+0.9
4,578,136	+				+1.8
4,578,143	-				+0.7
4,578,146	+				+1.3
4,578,187	-				+0.7
4,578,338	-		ABI39_RS18145	0.17	+0.7
4,578,444	+		ABI39_RS18145	0.24	+0.4
4,578,505	+		ABI39_RS18145	0.28	+0.4
4,578,506	-		ABI39_RS18145	0.28	+1.1
4,578,584	-		ABI39_RS18145	0.33	+1.2
4,578,635	+		ABI39_RS18145	0.36	+1.1
4,578,646	+		ABI39_RS18145	0.37	+0.6
4,578,646	+		ABI39_RS18145	0.37	+1.5
4,578,650	+		ABI39_RS18145	0.37	+1.7
4,578,688	+		ABI39_RS18145	0.40	+0.5
4,578,754	+		ABI39_RS18145	0.44	+0.5
4,578,904	-		ABI39_RS18145	0.54	+1.3
4,578,958	+		ABI39_RS18145	0.57	-0.7
4,578,961	+		ABI39_RS18145	0.58	+0.3
4,578,973	+		ABI39_RS18145	0.58	+0.3
4,579,043	+		ABI39_RS18145	0.63	+1.5
4,579,044	-		ABI39_RS18145	0.63	+2.0
4,579,048	-		ABI39_RS18145	0.63	+0.5