Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS11560

Experiment: Beta-Lactose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Beta-Lactose 2.5 mg/ml (C)
3,074,141	+		ABI39_RS11555	0.19	+0.5
3,074,142	-		ABI39_RS11555	0.19	+1.1
3,074,142	-		ABI39_RS11555	0.19	+0.3
3,074,159	+		ABI39_RS11555	0.21	+0.6
3,074,222	-		ABI39_RS11555	0.28	+0.4
3,074,224	-		ABI39_RS11555	0.28	-1.5
3,074,273	+		ABI39_RS11555	0.33	+0.5
3,074,275	+		ABI39_RS11555	0.34	-0.5
3,074,438	+		ABI39_RS11555	0.52	+0.5
3,074,439	-		ABI39_RS11555	0.52	-1.2
3,074,541	+		ABI39_RS11555	0.63	-0.3
3,074,617	-		ABI39_RS11555	0.72	-0.2
3,074,618	+		ABI39_RS11555	0.72	-1.0
3,074,618	+		ABI39_RS11555	0.72	+0.5
3,074,729	-		ABI39_RS11555	0.84	+0.4
3,075,018	+				+0.2
3,075,062	-				+0.5
3,075,062	-				+0.0
3,075,085	-				-1.3
3,075,117	-				-1.7
3,075,149	+		ABI39_RS11560	0.12	-0.1
3,075,185	-		ABI39_RS11560	0.15	-0.2
3,075,315	+		ABI39_RS11560	0.27	-1.8
3,075,318	-		ABI39_RS11560	0.27	-1.3
3,075,382	+		ABI39_RS11560	0.33	-0.8
3,075,427	+		ABI39_RS11560	0.37	-2.6
3,075,665	-		ABI39_RS11560	0.58	+0.2
3,075,770	-		ABI39_RS11560	0.67	+0.1
3,075,862	-		ABI39_RS11560	0.75	-1.4
3,075,862	-		ABI39_RS11560	0.75	-1.6
3,075,935	+		ABI39_RS11560	0.82	-1.5
3,075,939	+		ABI39_RS11560	0.82	-1.3
3,075,940	-		ABI39_RS11560	0.82	-0.3
3,076,162	-				+0.3
3,076,162	-				+0.0
3,076,167	+				-2.5
3,076,318	-		ABI39_RS11565	0.17	-0.4
3,076,318	-		ABI39_RS11565	0.17	+0.5
3,076,338	-		ABI39_RS11565	0.19	+0.4
3,076,583	+		ABI39_RS11565	0.44	-1.1
3,076,584	-		ABI39_RS11565	0.44	-0.7
3,076,584	-		ABI39_RS11565	0.44	-0.2
3,076,681	+		ABI39_RS11565	0.54	-1.1
3,076,749	-		ABI39_RS11565	0.61	-0.8
3,076,757	+		ABI39_RS11565	0.61	-0.9
3,076,872	+		ABI39_RS11565	0.73	-2.2
3,076,916	-		ABI39_RS11565	0.77	-0.2
3,076,919	+		ABI39_RS11565	0.78	-1.4
3,076,923	+		ABI39_RS11565	0.78	+0.3
3,077,029	+		ABI39_RS11565	0.89	+1.7