Experiment: Beta-Lactose 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABI39_RS06745 and ABI39_RS06750 are separated by 139 nucleotides ABI39_RS06750 and ABI39_RS06755 overlap by 11 nucleotides ABI39_RS06755 and ABI39_RS06760 are separated by 35 nucleotides
ABI39_RS06745: ABI39_RS06745 - hypothetical protein, at 1,874,343 to 1,875,416
_RS06745
ABI39_RS06750: ABI39_RS06750 - MobC family plasmid mobilization relaxosome protein, at 1,875,556 to 1,875,864
_RS06750
ABI39_RS06755: ABI39_RS06755 - relaxase/mobilization nuclease domain-containing protein, at 1,875,854 to 1,876,792
_RS06755
ABI39_RS06760: ABI39_RS06760 - hypothetical protein, at 1,876,828 to 1,877,232
_RS06760
Position (kb) 1875
1876 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1874.593 kb on - strand, within ABI39_RS06745 at 1874.595 kb on - strand, within ABI39_RS06745 at 1874.768 kb on + strand, within ABI39_RS06745 at 1875.862 kb on + strand at 1875.878 kb on - strand at 1875.950 kb on + strand, within ABI39_RS06755 at 1876.032 kb on + strand, within ABI39_RS06755 at 1876.093 kb on - strand, within ABI39_RS06755 at 1876.109 kb on + strand, within ABI39_RS06755 at 1876.109 kb on + strand, within ABI39_RS06755 at 1876.356 kb on - strand, within ABI39_RS06755 at 1876.365 kb on - strand, within ABI39_RS06755 at 1876.459 kb on - strand, within ABI39_RS06755 at 1876.574 kb on + strand, within ABI39_RS06755 at 1876.574 kb on + strand, within ABI39_RS06755 at 1876.592 kb on - strand, within ABI39_RS06755 at 1876.594 kb on + strand, within ABI39_RS06755 at 1876.650 kb on - strand, within ABI39_RS06755
Per-strain Table
Position Strand Gene LocusTag Fraction Beta-Lactose 2.5 mg/ml (C) remove 1,874,593 - ABI39_RS06745 0.23 -0.7 1,874,595 - ABI39_RS06745 0.23 -1.2 1,874,768 + ABI39_RS06745 0.40 +0.2 1,875,862 + -1.3 1,875,878 - -0.2 1,875,950 + ABI39_RS06755 0.10 -1.6 1,876,032 + ABI39_RS06755 0.19 +1.1 1,876,093 - ABI39_RS06755 0.25 -0.6 1,876,109 + ABI39_RS06755 0.27 -0.4 1,876,109 + ABI39_RS06755 0.27 -1.4 1,876,356 - ABI39_RS06755 0.53 +0.5 1,876,365 - ABI39_RS06755 0.54 +0.1 1,876,459 - ABI39_RS06755 0.64 -0.1 1,876,574 + ABI39_RS06755 0.77 -2.9 1,876,574 + ABI39_RS06755 0.77 -2.1 1,876,592 - ABI39_RS06755 0.79 +0.1 1,876,594 + ABI39_RS06755 0.79 -1.5 1,876,650 - ABI39_RS06755 0.85 -0.4
Or see this region's nucleotide sequence