Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS12865

Experiment: D-Raffinose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Raffinose 2.5 mg/ml (C)
3,366,988	+				-0.6
3,366,989	-				-0.5
3,367,227	+		ABI39_RS12860	0.31	+0.3
3,367,231	-		ABI39_RS12860	0.31	+0.2
3,367,241	+		ABI39_RS12860	0.32	+0.2
3,367,350	-		ABI39_RS12860	0.44	-0.2
3,367,390	-		ABI39_RS12860	0.48	-0.3
3,367,570	-		ABI39_RS12860	0.68	+0.3
3,367,583	-		ABI39_RS12860	0.69	+0.5
3,367,604	+		ABI39_RS12860	0.71	-0.2
3,367,604	+		ABI39_RS12860	0.71	+0.7
3,367,768	-		ABI39_RS12860	0.89	-0.9
3,367,849	-				+0.5
3,367,849	-				+0.6
3,367,852	+				+0.2
3,367,930	+				-0.3
3,367,930	+				-0.2
3,368,045	-		ABI39_RS12865	0.23	+0.0
3,368,102	+		ABI39_RS12865	0.36	+0.0
3,368,206	+		ABI39_RS12865	0.60	-0.7
3,368,209	+		ABI39_RS12865	0.60	-0.2
3,368,267	-		ABI39_RS12865	0.73	+0.5
3,368,267	-		ABI39_RS12865	0.73	-0.3
3,368,490	+				+0.7
3,368,509	+				+0.6