Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS09555

Experiment: NAG 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG 2.5 mg/ml (C)
2,577,544	-		ABI39_RS09550	0.50	+0.9
2,577,577	-		ABI39_RS09550	0.52	-0.5
2,577,583	+		ABI39_RS09550	0.53	+0.1
2,577,771	-		ABI39_RS09550	0.65	-0.5
2,577,812	+		ABI39_RS09550	0.67	+0.6
2,577,886	+		ABI39_RS09550	0.72	-0.6
2,577,920	-		ABI39_RS09550	0.74	+0.1
2,578,010	+		ABI39_RS09550	0.80	-0.4
2,578,039	+		ABI39_RS09550	0.82	-0.8
2,578,068	-		ABI39_RS09550	0.84	-0.6
2,578,078	-		ABI39_RS09550	0.84	-0.1
2,578,167	+		ABI39_RS09550	0.90	+0.4
2,578,255	+				+0.3
2,578,258	-				+0.9
2,578,315	-				-0.4
2,578,431	-				-0.4
2,578,440	+				+0.9
2,578,469	-		ABI39_RS09555	0.14	-1.8
2,578,500	+		ABI39_RS09555	0.28	-0.7
2,578,507	+		ABI39_RS09555	0.32	-0.6
2,578,587	-		ABI39_RS09555	0.68	-0.5
2,579,337	+		ABI39_RS09565	0.24	-0.1
2,579,392	+		ABI39_RS09565	0.31	+0.7
2,579,393	-		ABI39_RS09565	0.31	-0.6
2,579,397	+		ABI39_RS09565	0.31	-0.1
2,579,398	-		ABI39_RS09565	0.31	+0.1
2,579,450	+		ABI39_RS09565	0.37	+0.7
2,579,452	-		ABI39_RS09565	0.38	+0.4
2,579,452	-		ABI39_RS09565	0.38	-1.0
2,579,461	+		ABI39_RS09565	0.39	+0.3