Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS09490

Experiment: NAG 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG 2.5 mg/ml (C)
2,565,592	-		ABI39_RS09485	0.48	-0.4
2,565,626	+		ABI39_RS09485	0.50	+0.8
2,565,681	-		ABI39_RS09485	0.54	-1.0
2,565,745	-		ABI39_RS09485	0.59	-0.8
2,565,747	-		ABI39_RS09485	0.59	-0.3
2,565,747	-		ABI39_RS09485	0.59	+0.1
2,565,779	-		ABI39_RS09485	0.62	+0.4
2,565,796	+		ABI39_RS09485	0.63	-0.6
2,565,796	+		ABI39_RS09485	0.63	+0.0
2,565,797	-		ABI39_RS09485	0.63	+0.6
2,565,798	+		ABI39_RS09485	0.63	+0.0
2,565,798	+		ABI39_RS09485	0.63	+0.5
2,565,799	-		ABI39_RS09485	0.63	-0.5
2,565,799	-		ABI39_RS09485	0.63	-0.4
2,565,831	+		ABI39_RS09485	0.66	-0.5
2,565,861	-		ABI39_RS09485	0.68	-0.1
2,565,861	-		ABI39_RS09485	0.68	-1.1
2,565,880	+		ABI39_RS09485	0.69	-0.9
2,566,057	-		ABI39_RS09485	0.83	-1.0
2,566,184	-				-0.7
2,566,184	-				-0.0
2,566,184	-				+1.9
2,566,232	-				-0.2
2,566,273	+				-0.2
2,566,384	+				-0.1
2,566,399	+				+0.0
2,566,403	+				-0.7
2,566,466	-				+0.6
2,566,466	-				-0.1
2,566,517	-				+0.8
2,566,602	-		ABI39_RS09490	0.11	+1.2
2,566,675	+		ABI39_RS09490	0.16	+0.7
2,566,721	+		ABI39_RS09490	0.19	-0.2
2,566,725	-		ABI39_RS09490	0.20	+0.8
2,566,728	-		ABI39_RS09490	0.20	+0.7
2,566,733	+		ABI39_RS09490	0.20	+0.9
2,566,733	+		ABI39_RS09490	0.20	+0.1
2,566,733	+		ABI39_RS09490	0.20	+0.8
2,566,734	-		ABI39_RS09490	0.20	+1.0
2,566,757	-		ABI39_RS09490	0.22	+0.6
2,566,787	-		ABI39_RS09490	0.24	+0.2
2,566,787	-		ABI39_RS09490	0.24	-0.3
2,566,790	+		ABI39_RS09490	0.24	+0.1
2,566,790	-		ABI39_RS09490	0.24	+0.2
2,566,813	+		ABI39_RS09490	0.26	+1.1
2,567,032	+		ABI39_RS09490	0.41	+0.7
2,567,032	+		ABI39_RS09490	0.41	+0.2
2,567,088	+		ABI39_RS09490	0.45	+0.7
2,567,088	+		ABI39_RS09490	0.45	+0.6
2,567,088	+		ABI39_RS09490	0.45	-0.8
2,567,089	-		ABI39_RS09490	0.45	+0.1
2,567,322	+		ABI39_RS09490	0.61	+0.6
2,567,357	+		ABI39_RS09490	0.64	+0.1
2,567,362	+		ABI39_RS09490	0.64	+0.7
2,567,410	+		ABI39_RS09490	0.67	+1.1
2,567,565	-		ABI39_RS09490	0.78	+0.9
2,567,565	-		ABI39_RS09490	0.78	-0.8
2,567,691	+		ABI39_RS09490	0.87	+0.8
2,567,779	+				-0.8
2,567,780	-				+1.2
2,567,797	+				+0.6
2,568,741	-		ABI39_RS09500	0.31	-0.2
2,568,880	-		ABI39_RS09500	0.70	-1.1