Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS14240

Experiment: D-Xylose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose 2.5 mg/ml (C)
3,700,563	+		ABI39_RS14230	0.68	-0.5
3,700,563	+		ABI39_RS14230	0.68	-1.0
3,700,605	+		ABI39_RS14230	0.71	-0.8
3,700,723	+		ABI39_RS14230	0.80	-0.1
3,700,723	+		ABI39_RS14230	0.80	-1.0
3,700,723	+		ABI39_RS14230	0.80	+0.0
3,700,812	+		ABI39_RS14230	0.86	-0.9
3,700,813	-		ABI39_RS14230	0.86	-1.2
3,701,122	+				+0.0
3,701,188	-				-0.9
3,701,221	+		ABI39_RS14235	0.16	-1.1
3,701,536	+				-0.5
3,701,655	+		ABI39_RS14240	0.12	-1.2
3,701,760	-		ABI39_RS14240	0.23	-1.4
3,702,058	-		ABI39_RS14240	0.54	-1.3
3,702,127	-		ABI39_RS14240	0.61	-0.5
3,702,239	-		ABI39_RS14240	0.73	-0.1
3,702,403	+				-1.3
3,702,439	-				-0.9
3,702,505	-				-1.7
3,702,529	+				-0.5
3,702,529	+				+0.2
3,702,532	+				+0.2
3,702,534	+				+0.1
3,702,608	+				-0.7
3,702,626	+				-1.2
3,702,626	+				-1.4
3,702,627	-				-2.0
3,702,629	-				-1.1
3,702,630	+				-1.3
3,702,660	-				-1.5
3,702,689	+		ABI39_RS14245	0.12	+0.2
3,702,689	+		ABI39_RS14245	0.12	-0.8
3,702,689	+		ABI39_RS14245	0.12	-1.6
3,702,689	+		ABI39_RS14245	0.12	-1.4
3,702,689	+		ABI39_RS14245	0.12	-0.6
3,702,690	-		ABI39_RS14245	0.12	-1.9
3,703,026	+		ABI39_RS14245	0.39	-3.3
3,703,095	+		ABI39_RS14245	0.44	-0.5
3,703,098	-		ABI39_RS14245	0.44	-1.5
3,703,115	+		ABI39_RS14245	0.46	-1.7
3,703,340	+		ABI39_RS14245	0.63	-1.6
3,703,364	-		ABI39_RS14245	0.65	-1.5