Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS13500

Experiment: D-Xylose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose 2.5 mg/ml (C)
3,510,128	-		ABI39_RS13490	0.77	-0.1
3,510,160	-		ABI39_RS13490	0.79	-0.4
3,510,193	+		ABI39_RS13490	0.82	+0.7
3,510,194	-		ABI39_RS13490	0.82	+0.1
3,510,227	-		ABI39_RS13490	0.85	+0.7
3,510,447	+				+0.1
3,510,469	+				-0.2
3,510,470	-				+0.1
3,510,482	-		ABI39_RS13495	0.11	-0.7
3,510,483	+		ABI39_RS13495	0.11	-0.1
3,510,484	-		ABI39_RS13495	0.11	+0.6
3,510,512	+		ABI39_RS13495	0.16	-0.0
3,510,513	-		ABI39_RS13495	0.16	+0.2
3,510,642	+		ABI39_RS13495	0.39	+0.0
3,510,755	-		ABI39_RS13495	0.59	-1.7
3,510,819	-		ABI39_RS13495	0.70	+0.3
3,510,819	-		ABI39_RS13495	0.70	+0.8
3,510,822	+		ABI39_RS13495	0.71	+0.3
3,510,823	-		ABI39_RS13495	0.71	-0.1
3,510,823	-		ABI39_RS13495	0.71	+0.3
3,510,823	-		ABI39_RS13495	0.71	-0.2
3,510,829	-		ABI39_RS13495	0.72	+0.0
3,510,900	-		ABI39_RS13495	0.84	-0.1
3,510,901	+		ABI39_RS13495	0.85	+0.1
3,510,902	-		ABI39_RS13495	0.85	+0.9
3,510,931	-				+0.1
3,511,168	+				-1.7
3,511,298	-		ABI39_RS13500	0.12	-1.3
3,511,378	+		ABI39_RS13500	0.17	-0.3
3,511,379	-		ABI39_RS13500	0.17	+0.1
3,511,504	+		ABI39_RS13500	0.25	-2.0
3,511,506	+		ABI39_RS13500	0.25	-0.6
3,511,547	-		ABI39_RS13500	0.28	-2.0
3,511,790	-		ABI39_RS13500	0.43	-0.1
3,511,790	-		ABI39_RS13500	0.43	-1.3
3,511,992	+		ABI39_RS13500	0.55	-0.5
3,511,999	+		ABI39_RS13500	0.56	-0.2
3,512,000	-		ABI39_RS13500	0.56	-1.0
3,512,011	+		ABI39_RS13500	0.57	-0.0
3,512,185	+		ABI39_RS13500	0.67	-0.4
3,512,197	-		ABI39_RS13500	0.68	-0.2
3,512,220	+		ABI39_RS13500	0.70	-0.2
3,512,332	+		ABI39_RS13500	0.77	-0.3
3,512,425	+		ABI39_RS13500	0.82	-0.1
3,512,449	-		ABI39_RS13500	0.84	-0.1
3,512,485	+		ABI39_RS13500	0.86	+0.1
3,512,615	-				-0.4
3,512,699	+				-0.7
3,512,706	-				-0.6
3,512,742	+				-0.2
3,512,782	-				+0.6
3,512,891	+				+0.3
3,512,919	-				-0.8
3,512,923	-				-0.4
3,512,923	-				-0.8
3,512,929	-				-1.1
3,512,944	-				-0.8
3,513,026	+				+0.3
3,513,048	+				-0.0
3,513,049	-				+0.1
3,513,049	-				-0.3
3,513,403	-		ABI39_RS13505	0.14	-0.3
3,513,411	+		ABI39_RS13505	0.14	-0.2
3,513,415	+		ABI39_RS13505	0.14	-0.4
3,513,415	+		ABI39_RS13505	0.14	+0.3
3,513,415	+		ABI39_RS13505	0.14	-0.1
3,513,416	-		ABI39_RS13505	0.14	+0.2
3,513,416	-		ABI39_RS13505	0.14	+0.4
3,513,418	-		ABI39_RS13505	0.14	+0.2
3,513,499	-		ABI39_RS13505	0.17	+1.2
3,513,550	-		ABI39_RS13505	0.19	-0.6
3,513,577	-		ABI39_RS13505	0.19	-0.4
3,513,588	+		ABI39_RS13505	0.20	-0.3
3,513,602	-		ABI39_RS13505	0.20	-0.3
3,513,637	-		ABI39_RS13505	0.21	+0.4
3,513,693	-		ABI39_RS13505	0.23	+0.1