Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS06675

Experiment: D-Xylose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose 2.5 mg/ml (C)
1,854,984	-		ABI39_RS06670	0.55	-3.8
1,854,988	+		ABI39_RS06670	0.55	-1.9
1,855,284	+		ABI39_RS06670	0.71	-1.5
1,855,284	+		ABI39_RS06670	0.71	-2.1
1,855,294	-		ABI39_RS06670	0.72	-1.6
1,855,301	+		ABI39_RS06670	0.72	-4.0
1,855,350	+		ABI39_RS06670	0.75	-3.6
1,855,350	+		ABI39_RS06670	0.75	-4.5
1,855,351	-		ABI39_RS06670	0.75	-1.7
1,855,351	-		ABI39_RS06670	0.75	-3.8
1,855,359	-		ABI39_RS06670	0.75	-2.3
1,855,478	+		ABI39_RS06670	0.82	-2.0
1,855,536	+		ABI39_RS06670	0.85	-4.1
1,855,546	+		ABI39_RS06670	0.85	-1.2
1,855,548	+		ABI39_RS06670	0.86	-3.6
1,855,654	-				-1.9
1,855,655	+				-2.3
1,855,656	-				-3.4
1,855,742	+				-3.3
1,855,780	+				-2.9
1,855,812	+				-1.1
1,855,837	+				-2.1
1,855,849	+				-2.9
1,856,009	+		ABI39_RS06675	0.17	-2.4
1,856,009	+		ABI39_RS06675	0.17	-3.9
1,856,018	-		ABI39_RS06675	0.18	-2.2
1,856,018	-		ABI39_RS06675	0.18	-3.2
1,856,093	-		ABI39_RS06675	0.25	-3.1
1,856,208	-		ABI39_RS06675	0.37	-5.8
1,856,310	+		ABI39_RS06675	0.47	-2.6
1,856,447	-		ABI39_RS06675	0.61	-3.4
1,856,587	-		ABI39_RS06675	0.75	-2.7
1,856,644	+		ABI39_RS06675	0.80	+1.9
1,856,809	-				-3.1
1,856,841	-				-1.3
1,857,057	+				-0.0
1,857,098	+		ABI39_RS06680	0.15	+0.6
1,857,098	+		ABI39_RS06680	0.15	-0.0
1,857,298	-		ABI39_RS06680	0.45	+0.4
1,857,488	+		ABI39_RS06680	0.74	-0.0
1,857,498	-		ABI39_RS06680	0.75	-0.3
1,857,593	+		ABI39_RS06680	0.90	-0.2
1,857,678	+				+0.2
1,857,769	+				-0.9