Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS16945

Experiment: D-Xylose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose 2.5 mg/ml (C)
4,295,375	+		ABI39_RS16935	0.88	-0.1
4,295,458	-				-0.2
4,295,488	+				-0.8
4,295,553	+		ABI39_RS16940	0.16	-0.9
4,295,649	-		ABI39_RS16940	0.28	-0.5
4,295,726	-		ABI39_RS16940	0.37	-0.7
4,295,906	-		ABI39_RS16940	0.59	+0.2
4,295,955	+		ABI39_RS16940	0.65	+0.3
4,295,959	-		ABI39_RS16940	0.66	+0.2
4,295,959	-		ABI39_RS16940	0.66	-0.5
4,295,959	-		ABI39_RS16940	0.66	-0.4
4,296,038	+		ABI39_RS16940	0.76	+0.5
4,296,040	+		ABI39_RS16940	0.76	-1.1
4,296,205	-				+0.1
4,296,224	+				-0.7
4,296,234	-				+0.7
4,296,243	+				-0.2
4,296,353	-				+0.1
4,296,375	-				+0.0
4,296,383	-				+0.8
4,296,702	-		ABI39_RS16945	0.30	+0.4
4,296,703	+		ABI39_RS16945	0.30	-0.4
4,296,724	+		ABI39_RS16945	0.32	+0.8
4,296,745	+		ABI39_RS16945	0.34	+0.3
4,296,850	+		ABI39_RS16945	0.42	-0.2
4,296,968	+		ABI39_RS16945	0.52	+0.2
4,296,981	+		ABI39_RS16945	0.53	-0.5
4,296,981	+		ABI39_RS16945	0.53	+0.9
4,296,982	-		ABI39_RS16945	0.53	+0.8
4,297,015	+		ABI39_RS16945	0.55	+0.7
4,297,015	+		ABI39_RS16945	0.55	+1.0
4,297,015	+		ABI39_RS16945	0.55	+1.2
4,297,132	+		ABI39_RS16945	0.65	+1.0
4,297,132	+		ABI39_RS16945	0.65	-0.2
4,297,132	+		ABI39_RS16945	0.65	+0.0
4,297,132	+		ABI39_RS16945	0.65	+0.6
4,297,189	-		ABI39_RS16945	0.69	-0.8
4,297,339	+		ABI39_RS16945	0.82	-0.2
4,297,652	+		ABI39_RS16950	0.11	+0.8
4,297,721	+		ABI39_RS16950	0.21	+1.6
4,297,730	-		ABI39_RS16950	0.22	+1.2
4,297,730	-		ABI39_RS16950	0.22	-0.4
4,297,738	-		ABI39_RS16950	0.23	-1.8
4,297,746	-		ABI39_RS16950	0.25	+0.6
4,297,754	-		ABI39_RS16950	0.26	-0.1
4,297,962	-		ABI39_RS16950	0.57	+0.2
4,297,989	+		ABI39_RS16950	0.61	+0.5
4,298,005	+		ABI39_RS16950	0.63	+0.2
4,298,005	+		ABI39_RS16950	0.63	-0.8
4,298,097	-		ABI39_RS16950	0.77	+0.4
4,298,106	+		ABI39_RS16950	0.78	+0.3
4,298,145	+		ABI39_RS16950	0.84	-0.3
4,298,146	-		ABI39_RS16950	0.84	+0.0
4,298,197	+				-0.6
4,298,197	+				+0.2
4,298,207	-				+0.6
4,298,226	-				-0.1
4,298,345	+				+0.1
4,298,439	+				+0.4