Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS11415

Experiment: D-Mannose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannose 2.5 mg/ml (C)
3,034,559	+		ABI39_RS11410	0.66	-1.0
3,034,606	-		ABI39_RS11410	0.68	+0.0
3,034,608	+		ABI39_RS11410	0.68	+0.4
3,034,609	-		ABI39_RS11410	0.68	-1.8
3,034,919	+		ABI39_RS11410	0.83	-1.0
3,034,919	+		ABI39_RS11410	0.83	-0.0
3,034,920	-		ABI39_RS11410	0.83	+0.4
3,034,920	-		ABI39_RS11410	0.83	+0.1
3,034,949	-		ABI39_RS11410	0.84	-0.1
3,034,949	-		ABI39_RS11410	0.84	-0.1
3,034,971	-		ABI39_RS11410	0.85	-0.8
3,034,981	-		ABI39_RS11410	0.85	+0.2
3,035,026	-		ABI39_RS11410	0.88	-0.5
3,035,026	-		ABI39_RS11410	0.88	-0.6
3,035,060	-		ABI39_RS11410	0.89	-0.9
3,035,106	+				-0.4
3,035,107	-				-1.4
3,035,108	+				+0.1
3,035,109	-				-0.1
3,035,109	-				+0.1
3,035,109	-				-0.2
3,035,109	-				-0.5
3,035,149	-				-0.8
3,035,310	-				+0.3
3,035,325	-				-0.0
3,035,387	+				+0.1
3,035,387	+				+0.3
3,035,390	-				-0.3
3,035,521	+		ABI39_RS11415	0.14	-1.1
3,035,526	+		ABI39_RS11415	0.14	+0.4
3,035,526	+		ABI39_RS11415	0.14	+0.2
3,035,526	+		ABI39_RS11415	0.14	+0.7
3,035,543	+		ABI39_RS11415	0.16	-0.2
3,035,544	-		ABI39_RS11415	0.16	-0.8
3,035,557	+		ABI39_RS11415	0.17	-0.8
3,035,558	-		ABI39_RS11415	0.17	-0.6
3,035,756	-		ABI39_RS11415	0.34	-0.4
3,035,790	+		ABI39_RS11415	0.36	-2.2
3,036,048	+		ABI39_RS11415	0.58	-0.6
3,036,049	-		ABI39_RS11415	0.58	-0.8
3,036,049	-		ABI39_RS11415	0.58	-0.7
3,036,051	+		ABI39_RS11415	0.58	-0.8
3,036,051	+		ABI39_RS11415	0.58	-1.0
3,036,082	-		ABI39_RS11415	0.61	-0.3
3,036,197	+		ABI39_RS11415	0.71	-1.1
3,036,197	+		ABI39_RS11415	0.71	-0.5
3,036,201	-		ABI39_RS11415	0.71	-0.9
3,036,489	+				-0.3
3,036,551	-				-1.7
3,036,552	+				-0.7
3,036,584	-				-0.6
3,036,673	+				-1.4
3,036,740	-				-0.8
3,036,758	+				-1.7
3,037,196	-		ABI39_RS11420	0.16	-1.1