Strain Fitness in Escherichia coli ECOR27 around NOLOHH_22725

Experiment: Bas37

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntybhL and moaE are separated by 136 nucleotidesmoaE and moaD are separated by 1 nucleotidesmoaD and moaC overlap by 8 nucleotidesmoaC and moaB are separated by 2 nucleotidesmoaB and moaA are separated by 21 nucleotides NOLOHH_22710: ybhL - Inner membrane protein YbhL, at 4,484,320 to 4,485,024 ybhL NOLOHH_22715: moaE - molybdopterin synthase catalytic subunit MoaE, at 4,485,161 to 4,485,613 moaE NOLOHH_22720: moaD - molybdopterin synthase sulfur carrier subunit, at 4,485,615 to 4,485,860 moaD NOLOHH_22725: moaC - cyclic pyranopterin monophosphate synthase MoaC, at 4,485,853 to 4,486,338 moaC NOLOHH_22730: moaB - molybdenum cofactor biosynthesis protein B, at 4,486,341 to 4,486,853 moaB NOLOHH_22735: moaA - GTP 3',8-cyclase MoaA, at 4,486,875 to 4,487,864 moaA Position (kb) 4485 4486 4487Strain fitness (log2 ratio) -2 -1 0 1 2at 4484.966 kb on + strandat 4484.966 kb on + strandat 4484.966 kb on + strandat 4484.993 kb on - strandat 4485.044 kb on - strandat 4485.044 kb on - strandat 4485.044 kb on - strandat 4485.051 kb on - strandat 4485.103 kb on + strandat 4485.103 kb on + strandat 4485.103 kb on + strandat 4485.107 kb on + strandat 4485.108 kb on - strandat 4485.272 kb on - strand, within moaEat 4485.272 kb on - strand, within moaEat 4485.274 kb on + strand, within moaEat 4485.351 kb on - strand, within moaEat 4485.351 kb on - strand, within moaEat 4485.490 kb on + strand, within moaEat 4485.506 kb on - strand, within moaEat 4485.512 kb on - strand, within moaEat 4485.617 kb on - strandat 4485.617 kb on - strandat 4485.646 kb on - strand, within moaDat 4485.874 kb on - strandat 4485.874 kb on - strandat 4485.931 kb on - strand, within moaCat 4485.959 kb on + strand, within moaCat 4485.960 kb on - strand, within moaCat 4486.034 kb on - strand, within moaCat 4486.034 kb on - strand, within moaCat 4486.034 kb on - strand, within moaCat 4486.034 kb on - strand, within moaCat 4486.043 kb on - strand, within moaCat 4486.043 kb on - strand, within moaCat 4486.075 kb on + strand, within moaCat 4486.177 kb on + strand, within moaCat 4486.207 kb on - strand, within moaCat 4486.207 kb on - strand, within moaCat 4486.338 kb on + strandat 4486.339 kb on - strandat 4486.339 kb on - strandat 4486.339 kb on - strandat 4486.339 kb on - strandat 4486.342 kb on + strandat 4486.342 kb on + strandat 4486.342 kb on + strandat 4486.342 kb on + strandat 4486.343 kb on - strandat 4486.343 kb on - strandat 4486.343 kb on - strandat 4486.343 kb on - strandat 4486.343 kb on - strandat 4486.629 kb on - strand, within moaBat 4486.644 kb on + strand, within moaBat 4486.645 kb on - strand, within moaBat 4486.672 kb on - strand, within moaBat 4486.797 kb on - strand, within moaBat 4486.797 kb on - strand, within moaBat 4486.811 kb on + strandat 4486.812 kb on - strandat 4486.812 kb on - strandat 4486.842 kb on + strandat 4486.889 kb on - strandat 4486.889 kb on - strandat 4486.908 kb on - strandat 4487.187 kb on + strand, within moaAat 4487.188 kb on - strand, within moaAat 4487.188 kb on - strand, within moaA

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas37
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4,484,966 + +0.9
4,484,966 + +2.6
4,484,966 + +0.4
4,484,993 - -1.6
4,485,044 - +0.8
4,485,044 - +0.4
4,485,044 - -1.0
4,485,051 - +1.3
4,485,103 + -0.5
4,485,103 + +0.4
4,485,103 + -0.3
4,485,107 + +2.0
4,485,108 - -0.4
4,485,272 - moaE NOLOHH_22715 0.25 -0.3
4,485,272 - moaE NOLOHH_22715 0.25 +0.5
4,485,274 + moaE NOLOHH_22715 0.25 -0.2
4,485,351 - moaE NOLOHH_22715 0.42 -0.8
4,485,351 - moaE NOLOHH_22715 0.42 -1.8
4,485,490 + moaE NOLOHH_22715 0.73 -1.5
4,485,506 - moaE NOLOHH_22715 0.76 -1.2
4,485,512 - moaE NOLOHH_22715 0.77 -0.7
4,485,617 - -0.5
4,485,617 - +0.9
4,485,646 - moaD NOLOHH_22720 0.13 +1.6
4,485,874 - +0.3
4,485,874 - +0.1
4,485,931 - moaC NOLOHH_22725 0.16 -1.5
4,485,959 + moaC NOLOHH_22725 0.22 -1.5
4,485,960 - moaC NOLOHH_22725 0.22 -1.7
4,486,034 - moaC NOLOHH_22725 0.37 -0.4
4,486,034 - moaC NOLOHH_22725 0.37 +0.2
4,486,034 - moaC NOLOHH_22725 0.37 -0.3
4,486,034 - moaC NOLOHH_22725 0.37 +0.0
4,486,043 - moaC NOLOHH_22725 0.39 -1.5
4,486,043 - moaC NOLOHH_22725 0.39 -0.5
4,486,075 + moaC NOLOHH_22725 0.46 -0.2
4,486,177 + moaC NOLOHH_22725 0.67 -2.0
4,486,207 - moaC NOLOHH_22725 0.73 +0.1
4,486,207 - moaC NOLOHH_22725 0.73 -1.0
4,486,338 + +0.3
4,486,339 - -0.7
4,486,339 - -0.7
4,486,339 - -1.4
4,486,339 - -0.8
4,486,342 + +0.6
4,486,342 + +0.7
4,486,342 + -2.2
4,486,342 + -0.8
4,486,343 - +1.1
4,486,343 - +1.7
4,486,343 - -0.1
4,486,343 - -0.1
4,486,343 - -0.5
4,486,629 - moaB NOLOHH_22730 0.56 -0.5
4,486,644 + moaB NOLOHH_22730 0.59 -0.7
4,486,645 - moaB NOLOHH_22730 0.59 +0.1
4,486,672 - moaB NOLOHH_22730 0.65 +0.0
4,486,797 - moaB NOLOHH_22730 0.89 +0.7
4,486,797 - moaB NOLOHH_22730 0.89 +1.0
4,486,811 + -0.9
4,486,812 - +1.2
4,486,812 - -1.4
4,486,842 + +0.1
4,486,889 - -0.8
4,486,889 - +0.2
4,486,908 - -0.5
4,487,187 + moaA NOLOHH_22735 0.32 -1.3
4,487,188 - moaA NOLOHH_22735 0.32 +0.7
4,487,188 - moaA NOLOHH_22735 0.32 +0.1

Or see this region's nucleotide sequence