Strain Fitness in Escherichia coli ECOR27 around NOLOHH_22715

Experiment: Bas37

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntNOLOHH_22705 and ybhL are separated by 77 nucleotidesybhL and moaE are separated by 136 nucleotidesmoaE and moaD are separated by 1 nucleotidesmoaD and moaC overlap by 8 nucleotidesmoaC and moaB are separated by 2 nucleotides NOLOHH_22705: NOLOHH_22705 - hypothetical protein, at 4,483,793 to 4,484,242 _22705 NOLOHH_22710: ybhL - Inner membrane protein YbhL, at 4,484,320 to 4,485,024 ybhL NOLOHH_22715: moaE - molybdopterin synthase catalytic subunit MoaE, at 4,485,161 to 4,485,613 moaE NOLOHH_22720: moaD - molybdopterin synthase sulfur carrier subunit, at 4,485,615 to 4,485,860 moaD NOLOHH_22725: moaC - cyclic pyranopterin monophosphate synthase MoaC, at 4,485,853 to 4,486,338 moaC NOLOHH_22730: moaB - molybdenum cofactor biosynthesis protein B, at 4,486,341 to 4,486,853 moaB Position (kb) 4485 4486Strain fitness (log2 ratio) -2 -1 0 1 2at 4484.198 kb on + strandat 4484.202 kb on + strandat 4484.211 kb on + strandat 4484.211 kb on + strandat 4484.211 kb on + strandat 4484.211 kb on + strandat 4484.211 kb on + strandat 4484.211 kb on + strandat 4484.212 kb on - strandat 4484.379 kb on - strandat 4484.511 kb on - strand, within ybhLat 4484.515 kb on - strand, within ybhLat 4484.599 kb on - strand, within ybhLat 4484.615 kb on - strand, within ybhLat 4484.615 kb on - strand, within ybhLat 4484.634 kb on - strand, within ybhLat 4484.706 kb on - strand, within ybhLat 4484.717 kb on - strand, within ybhLat 4484.966 kb on + strandat 4484.966 kb on + strandat 4484.966 kb on + strandat 4484.993 kb on - strandat 4485.044 kb on - strandat 4485.044 kb on - strandat 4485.044 kb on - strandat 4485.051 kb on - strandat 4485.103 kb on + strandat 4485.103 kb on + strandat 4485.103 kb on + strandat 4485.107 kb on + strandat 4485.108 kb on - strandat 4485.272 kb on - strand, within moaEat 4485.272 kb on - strand, within moaEat 4485.274 kb on + strand, within moaEat 4485.351 kb on - strand, within moaEat 4485.351 kb on - strand, within moaEat 4485.490 kb on + strand, within moaEat 4485.506 kb on - strand, within moaEat 4485.512 kb on - strand, within moaEat 4485.617 kb on - strandat 4485.617 kb on - strandat 4485.646 kb on - strand, within moaDat 4485.874 kb on - strandat 4485.874 kb on - strandat 4485.931 kb on - strand, within moaCat 4485.959 kb on + strand, within moaCat 4485.960 kb on - strand, within moaCat 4486.034 kb on - strand, within moaCat 4486.034 kb on - strand, within moaCat 4486.034 kb on - strand, within moaCat 4486.034 kb on - strand, within moaCat 4486.043 kb on - strand, within moaCat 4486.043 kb on - strand, within moaCat 4486.075 kb on + strand, within moaCat 4486.177 kb on + strand, within moaCat 4486.207 kb on - strand, within moaCat 4486.207 kb on - strand, within moaCat 4486.338 kb on + strandat 4486.339 kb on - strandat 4486.339 kb on - strandat 4486.339 kb on - strandat 4486.339 kb on - strandat 4486.342 kb on + strandat 4486.342 kb on + strandat 4486.342 kb on + strandat 4486.342 kb on + strandat 4486.343 kb on - strandat 4486.343 kb on - strandat 4486.343 kb on - strandat 4486.343 kb on - strandat 4486.343 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas37
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4,484,198 + +0.1
4,484,202 + -1.1
4,484,211 + -0.7
4,484,211 + -0.6
4,484,211 + -1.0
4,484,211 + +0.4
4,484,211 + -1.1
4,484,211 + +0.2
4,484,212 - +0.4
4,484,379 - +0.7
4,484,511 - ybhL NOLOHH_22710 0.27 +1.6
4,484,515 - ybhL NOLOHH_22710 0.28 -0.5
4,484,599 - ybhL NOLOHH_22710 0.40 +0.5
4,484,615 - ybhL NOLOHH_22710 0.42 +0.4
4,484,615 - ybhL NOLOHH_22710 0.42 +0.8
4,484,634 - ybhL NOLOHH_22710 0.45 -0.4
4,484,706 - ybhL NOLOHH_22710 0.55 +0.3
4,484,717 - ybhL NOLOHH_22710 0.56 -0.4
4,484,966 + +0.9
4,484,966 + +2.6
4,484,966 + +0.4
4,484,993 - -1.6
4,485,044 - +0.8
4,485,044 - +0.4
4,485,044 - -1.0
4,485,051 - +1.3
4,485,103 + -0.5
4,485,103 + +0.4
4,485,103 + -0.3
4,485,107 + +2.0
4,485,108 - -0.4
4,485,272 - moaE NOLOHH_22715 0.25 -0.3
4,485,272 - moaE NOLOHH_22715 0.25 +0.5
4,485,274 + moaE NOLOHH_22715 0.25 -0.2
4,485,351 - moaE NOLOHH_22715 0.42 -0.8
4,485,351 - moaE NOLOHH_22715 0.42 -1.8
4,485,490 + moaE NOLOHH_22715 0.73 -1.5
4,485,506 - moaE NOLOHH_22715 0.76 -1.2
4,485,512 - moaE NOLOHH_22715 0.77 -0.7
4,485,617 - -0.5
4,485,617 - +0.9
4,485,646 - moaD NOLOHH_22720 0.13 +1.6
4,485,874 - +0.3
4,485,874 - +0.1
4,485,931 - moaC NOLOHH_22725 0.16 -1.5
4,485,959 + moaC NOLOHH_22725 0.22 -1.5
4,485,960 - moaC NOLOHH_22725 0.22 -1.7
4,486,034 - moaC NOLOHH_22725 0.37 -0.4
4,486,034 - moaC NOLOHH_22725 0.37 +0.2
4,486,034 - moaC NOLOHH_22725 0.37 -0.3
4,486,034 - moaC NOLOHH_22725 0.37 +0.0
4,486,043 - moaC NOLOHH_22725 0.39 -1.5
4,486,043 - moaC NOLOHH_22725 0.39 -0.5
4,486,075 + moaC NOLOHH_22725 0.46 -0.2
4,486,177 + moaC NOLOHH_22725 0.67 -2.0
4,486,207 - moaC NOLOHH_22725 0.73 +0.1
4,486,207 - moaC NOLOHH_22725 0.73 -1.0
4,486,338 + +0.3
4,486,339 - -0.7
4,486,339 - -0.7
4,486,339 - -1.4
4,486,339 - -0.8
4,486,342 + +0.6
4,486,342 + +0.7
4,486,342 + -2.2
4,486,342 + -0.8
4,486,343 - +1.1
4,486,343 - +1.7
4,486,343 - -0.1
4,486,343 - -0.1
4,486,343 - -0.5

Or see this region's nucleotide sequence