Experiment: Bas37
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt adhP and yddM are separated by 146 nucleotides yddM and fdnI are separated by 50 nucleotides fdnI and fdnH overlap by 8 nucleotides
NOLOHH_19040: adhP - alcohol dehydrogenase AdhP, at 3,741,278 to 3,742,288
adhP
NOLOHH_19045: yddM - HigA family addiction module antitoxin, at 3,742,435 to 3,742,719
yddM
NOLOHH_19050: fdnI - formate dehydrogenase-N subunit gamma, at 3,742,770 to 3,743,423
fdnI
NOLOHH_19055: fdnH - formate dehydrogenase N subunit beta, at 3,743,416 to 3,744,300
fdnH
Position (kb) 3742
3743 Strain fitness (log2 ratio) -2
-1
0
1 at 3741.562 kb on + strand, within adhP at 3741.562 kb on + strand, within adhP at 3741.729 kb on - strand, within adhP at 3742.069 kb on + strand, within adhP at 3742.346 kb on + strand at 3742.346 kb on + strand at 3742.346 kb on + strand at 3742.363 kb on + strand at 3742.471 kb on - strand, within yddM at 3742.494 kb on + strand, within yddM at 3742.596 kb on + strand, within yddM at 3742.772 kb on - strand at 3742.772 kb on - strand at 3742.772 kb on - strand at 3742.772 kb on - strand at 3742.774 kb on - strand at 3742.913 kb on - strand, within fdnI at 3742.913 kb on - strand, within fdnI at 3742.913 kb on - strand, within fdnI at 3742.913 kb on - strand, within fdnI at 3742.913 kb on - strand, within fdnI at 3742.913 kb on - strand, within fdnI at 3742.913 kb on - strand, within fdnI at 3742.913 kb on - strand, within fdnI at 3742.913 kb on - strand, within fdnI at 3742.913 kb on - strand, within fdnI at 3742.913 kb on - strand, within fdnI at 3742.913 kb on - strand, within fdnI at 3742.916 kb on + strand, within fdnI at 3742.917 kb on - strand, within fdnI at 3742.917 kb on - strand, within fdnI at 3742.917 kb on - strand, within fdnI at 3742.917 kb on - strand, within fdnI at 3742.917 kb on - strand, within fdnI at 3742.917 kb on - strand, within fdnI at 3742.917 kb on - strand, within fdnI at 3743.099 kb on - strand, within fdnI at 3743.099 kb on - strand, within fdnI at 3743.169 kb on - strand, within fdnI at 3743.214 kb on - strand, within fdnI at 3743.214 kb on - strand, within fdnI at 3743.418 kb on - strand at 3743.625 kb on - strand, within fdnH at 3743.625 kb on - strand, within fdnH at 3743.629 kb on - strand, within fdnH at 3743.629 kb on - strand, within fdnH at 3743.629 kb on - strand, within fdnH
Per-strain Table
Position Strand Gene LocusTag Fraction Bas37 remove 3,741,562 + adhP NOLOHH_19040 0.28 -1.9 3,741,562 + adhP NOLOHH_19040 0.28 -0.4 3,741,729 - adhP NOLOHH_19040 0.45 +0.4 3,742,069 + adhP NOLOHH_19040 0.78 -1.2 3,742,346 + +0.0 3,742,346 + +0.3 3,742,346 + +0.6 3,742,363 + -1.7 3,742,471 - yddM NOLOHH_19045 0.13 -1.1 3,742,494 + yddM NOLOHH_19045 0.21 +0.6 3,742,596 + yddM NOLOHH_19045 0.56 -0.9 3,742,772 - -0.7 3,742,772 - +0.8 3,742,772 - +0.2 3,742,772 - +0.4 3,742,774 - -1.1 3,742,913 - fdnI NOLOHH_19050 0.22 -0.0 3,742,913 - fdnI NOLOHH_19050 0.22 +1.0 3,742,913 - fdnI NOLOHH_19050 0.22 -0.2 3,742,913 - fdnI NOLOHH_19050 0.22 -0.5 3,742,913 - fdnI NOLOHH_19050 0.22 +0.2 3,742,913 - fdnI NOLOHH_19050 0.22 +1.6 3,742,913 - fdnI NOLOHH_19050 0.22 +0.3 3,742,913 - fdnI NOLOHH_19050 0.22 +0.9 3,742,913 - fdnI NOLOHH_19050 0.22 -0.0 3,742,913 - fdnI NOLOHH_19050 0.22 -0.5 3,742,913 - fdnI NOLOHH_19050 0.22 +0.2 3,742,913 - fdnI NOLOHH_19050 0.22 -0.2 3,742,916 + fdnI NOLOHH_19050 0.22 -0.6 3,742,917 - fdnI NOLOHH_19050 0.22 +0.0 3,742,917 - fdnI NOLOHH_19050 0.22 -1.8 3,742,917 - fdnI NOLOHH_19050 0.22 +0.6 3,742,917 - fdnI NOLOHH_19050 0.22 -0.2 3,742,917 - fdnI NOLOHH_19050 0.22 -0.8 3,742,917 - fdnI NOLOHH_19050 0.22 +0.5 3,742,917 - fdnI NOLOHH_19050 0.22 -0.0 3,743,099 - fdnI NOLOHH_19050 0.50 +1.6 3,743,099 - fdnI NOLOHH_19050 0.50 -0.0 3,743,169 - fdnI NOLOHH_19050 0.61 +0.2 3,743,214 - fdnI NOLOHH_19050 0.68 +1.2 3,743,214 - fdnI NOLOHH_19050 0.68 +0.2 3,743,418 - -0.2 3,743,625 - fdnH NOLOHH_19055 0.24 +0.6 3,743,625 - fdnH NOLOHH_19055 0.24 -0.3 3,743,629 - fdnH NOLOHH_19055 0.24 +0.1 3,743,629 - fdnH NOLOHH_19055 0.24 +0.6 3,743,629 - fdnH NOLOHH_19055 0.24 -0.4
Or see this region's nucleotide sequence