Experiment: Bas37
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt wcaM and NOLOHH_15730 are separated by 157 nucleotides NOLOHH_15730 and galF are separated by 242 nucleotides
NOLOHH_15725: wcaM - colanic acid biosynthesis protein WcaM, at 3,098,182 to 3,099,576
wcaM
NOLOHH_15730: NOLOHH_15730 - N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase, at 3,099,734 to 3,100,729
_15730
NOLOHH_15735: galF - UTP--glucose-1-phosphate uridylyltransferase GalF, at 3,100,972 to 3,101,865
galF
Position (kb)
3099
3100
3101 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 3098.865 kb on - strand, within wcaM at 3098.865 kb on - strand, within wcaM at 3098.865 kb on - strand, within wcaM at 3098.880 kb on + strand, within wcaM at 3098.881 kb on - strand, within wcaM at 3098.884 kb on + strand, within wcaM at 3098.885 kb on - strand, within wcaM at 3098.885 kb on - strand, within wcaM at 3098.890 kb on - strand, within wcaM at 3098.890 kb on - strand, within wcaM at 3099.103 kb on - strand, within wcaM at 3099.282 kb on + strand, within wcaM at 3099.282 kb on + strand, within wcaM at 3099.283 kb on - strand, within wcaM at 3099.283 kb on - strand, within wcaM at 3099.430 kb on - strand, within wcaM at 3099.607 kb on + strand at 3099.607 kb on + strand at 3099.637 kb on + strand at 3099.637 kb on + strand at 3099.644 kb on + strand at 3099.693 kb on + strand at 3099.723 kb on + strand at 3099.927 kb on + strand, within NOLOHH_15730 at 3099.927 kb on + strand, within NOLOHH_15730 at 3099.927 kb on + strand, within NOLOHH_15730 at 3099.930 kb on + strand, within NOLOHH_15730 at 3099.957 kb on + strand, within NOLOHH_15730 at 3099.977 kb on + strand, within NOLOHH_15730 at 3100.042 kb on + strand, within NOLOHH_15730 at 3100.051 kb on + strand, within NOLOHH_15730 at 3100.138 kb on + strand, within NOLOHH_15730 at 3100.138 kb on + strand, within NOLOHH_15730 at 3100.138 kb on + strand, within NOLOHH_15730 at 3100.172 kb on + strand, within NOLOHH_15730 at 3100.253 kb on + strand, within NOLOHH_15730 at 3100.253 kb on + strand, within NOLOHH_15730 at 3100.255 kb on + strand, within NOLOHH_15730 at 3100.288 kb on + strand, within NOLOHH_15730 at 3100.288 kb on + strand, within NOLOHH_15730 at 3100.313 kb on + strand, within NOLOHH_15730 at 3100.313 kb on + strand, within NOLOHH_15730 at 3100.313 kb on + strand, within NOLOHH_15730 at 3100.313 kb on + strand, within NOLOHH_15730 at 3100.313 kb on + strand, within NOLOHH_15730 at 3100.315 kb on + strand, within NOLOHH_15730 at 3100.315 kb on + strand, within NOLOHH_15730 at 3100.328 kb on + strand, within NOLOHH_15730 at 3100.358 kb on + strand, within NOLOHH_15730 at 3100.396 kb on + strand, within NOLOHH_15730 at 3100.477 kb on + strand, within NOLOHH_15730 at 3100.477 kb on + strand, within NOLOHH_15730 at 3100.525 kb on + strand, within NOLOHH_15730 at 3100.540 kb on + strand, within NOLOHH_15730 at 3100.645 kb on + strand at 3100.645 kb on + strand at 3100.645 kb on + strand at 3100.679 kb on + strand at 3100.710 kb on + strand at 3100.710 kb on + strand at 3100.710 kb on + strand at 3100.710 kb on + strand at 3100.786 kb on + strand at 3100.798 kb on + strand at 3100.889 kb on + strand at 3100.899 kb on + strand at 3100.899 kb on + strand at 3100.901 kb on + strand at 3100.901 kb on + strand at 3100.901 kb on + strand at 3100.901 kb on + strand at 3100.901 kb on + strand at 3100.903 kb on + strand at 3100.903 kb on + strand at 3101.019 kb on + strand at 3101.019 kb on + strand at 3101.019 kb on + strand at 3101.086 kb on + strand, within galF at 3101.182 kb on + strand, within galF at 3101.315 kb on + strand, within galF at 3101.315 kb on + strand, within galF at 3101.676 kb on + strand, within galF
Per-strain Table
Position Strand Gene LocusTag Fraction Bas37 remove 3,098,865 - wcaM NOLOHH_15725 0.49 -2.1 3,098,865 - wcaM NOLOHH_15725 0.49 +0.4 3,098,865 - wcaM NOLOHH_15725 0.49 -0.1 3,098,880 + wcaM NOLOHH_15725 0.50 -0.6 3,098,881 - wcaM NOLOHH_15725 0.50 -2.1 3,098,884 + wcaM NOLOHH_15725 0.50 -1.0 3,098,885 - wcaM NOLOHH_15725 0.50 +0.2 3,098,885 - wcaM NOLOHH_15725 0.50 +1.0 3,098,890 - wcaM NOLOHH_15725 0.51 +0.9 3,098,890 - wcaM NOLOHH_15725 0.51 -0.7 3,099,103 - wcaM NOLOHH_15725 0.66 +0.1 3,099,282 + wcaM NOLOHH_15725 0.79 +0.3 3,099,282 + wcaM NOLOHH_15725 0.79 +1.3 3,099,283 - wcaM NOLOHH_15725 0.79 -0.6 3,099,283 - wcaM NOLOHH_15725 0.79 +0.0 3,099,430 - wcaM NOLOHH_15725 0.89 +0.9 3,099,607 + -1.1 3,099,607 + +0.3 3,099,637 + +0.3 3,099,637 + -1.2 3,099,644 + -0.4 3,099,693 + +0.1 3,099,723 + -3.8 3,099,927 + NOLOHH_15730 0.19 -3.0 3,099,927 + NOLOHH_15730 0.19 -4.2 3,099,927 + NOLOHH_15730 0.19 -1.5 3,099,930 + NOLOHH_15730 0.20 -2.9 3,099,957 + NOLOHH_15730 0.22 -4.0 3,099,977 + NOLOHH_15730 0.24 -3.9 3,100,042 + NOLOHH_15730 0.31 -5.5 3,100,051 + NOLOHH_15730 0.32 -4.7 3,100,138 + NOLOHH_15730 0.41 -4.4 3,100,138 + NOLOHH_15730 0.41 -4.2 3,100,138 + NOLOHH_15730 0.41 -4.4 3,100,172 + NOLOHH_15730 0.44 -2.1 3,100,253 + NOLOHH_15730 0.52 -3.9 3,100,253 + NOLOHH_15730 0.52 -4.5 3,100,255 + NOLOHH_15730 0.52 -3.6 3,100,288 + NOLOHH_15730 0.56 -0.5 3,100,288 + NOLOHH_15730 0.56 -3.7 3,100,313 + NOLOHH_15730 0.58 -4.2 3,100,313 + NOLOHH_15730 0.58 -2.4 3,100,313 + NOLOHH_15730 0.58 -0.2 3,100,313 + NOLOHH_15730 0.58 -4.1 3,100,313 + NOLOHH_15730 0.58 -1.1 3,100,315 + NOLOHH_15730 0.58 -4.1 3,100,315 + NOLOHH_15730 0.58 -1.9 3,100,328 + NOLOHH_15730 0.60 -5.4 3,100,358 + NOLOHH_15730 0.63 -2.1 3,100,396 + NOLOHH_15730 0.66 -2.8 3,100,477 + NOLOHH_15730 0.75 -4.6 3,100,477 + NOLOHH_15730 0.75 -0.5 3,100,525 + NOLOHH_15730 0.79 -4.2 3,100,540 + NOLOHH_15730 0.81 -2.6 3,100,645 + -3.2 3,100,645 + -3.8 3,100,645 + -2.9 3,100,679 + -2.3 3,100,710 + -5.1 3,100,710 + -4.3 3,100,710 + -5.0 3,100,710 + -1.4 3,100,786 + -0.3 3,100,798 + -0.2 3,100,889 + -1.5 3,100,899 + -0.0 3,100,899 + -0.4 3,100,901 + +0.2 3,100,901 + +0.2 3,100,901 + +0.5 3,100,901 + -0.2 3,100,901 + -1.6 3,100,903 + -0.2 3,100,903 + -0.8 3,101,019 + +2.1 3,101,019 + -0.5 3,101,019 + -1.7 3,101,086 + galF NOLOHH_15735 0.13 +0.3 3,101,182 + galF NOLOHH_15735 0.23 -0.3 3,101,315 + galF NOLOHH_15735 0.38 +1.1 3,101,315 + galF NOLOHH_15735 0.38 +1.1 3,101,676 + galF NOLOHH_15735 0.79 -1.8
Or see this region's nucleotide sequence