Experiment: Bas37
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt fruB and fruB overlap by 1 nucleotides fruB and fruA are separated by 16 nucleotides
NOLOHH_15010: fruB - fused PTS fructose transporter subunit IIA/HPr protein, at 2,940,721 to 2,941,851
fruB
NOLOHH_15015: fruB - fused PTS fructose transporter subunit IIA/HPr protein, at 2,941,851 to 2,942,789
fruB
NOLOHH_15020: fruA - PTS fructose transporter subunit IIBC, at 2,942,806 to 2,944,497
fruA
Position (kb)
2941
2942
2943 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2940.891 kb on + strand, within fruB at 2940.953 kb on + strand, within fruB at 2941.000 kb on + strand, within fruB at 2941.465 kb on - strand, within fruB at 2941.644 kb on + strand, within fruB at 2941.659 kb on + strand, within fruB at 2941.659 kb on + strand, within fruB at 2941.746 kb on + strand at 2941.868 kb on + strand at 2941.868 kb on + strand at 2941.868 kb on + strand at 2941.868 kb on + strand at 2941.868 kb on + strand at 2941.890 kb on + strand at 2941.890 kb on + strand at 2941.890 kb on + strand at 2941.993 kb on + strand, within fruB at 2941.996 kb on + strand, within fruB at 2942.107 kb on + strand, within fruB at 2942.107 kb on + strand, within fruB at 2942.351 kb on + strand, within fruB at 2942.593 kb on + strand, within fruB at 2942.618 kb on + strand, within fruB at 2942.726 kb on + strand at 2942.773 kb on + strand at 2942.773 kb on + strand at 2942.783 kb on + strand at 2942.854 kb on + strand at 2942.854 kb on + strand at 2942.854 kb on + strand at 2942.854 kb on + strand at 2942.855 kb on - strand at 2942.855 kb on - strand at 2942.855 kb on - strand at 2942.856 kb on + strand at 2943.003 kb on + strand, within fruA at 2943.067 kb on + strand, within fruA at 2943.122 kb on + strand, within fruA at 2943.122 kb on + strand, within fruA at 2943.346 kb on + strand, within fruA at 2943.346 kb on + strand, within fruA at 2943.346 kb on + strand, within fruA at 2943.346 kb on + strand, within fruA at 2943.346 kb on + strand, within fruA at 2943.351 kb on + strand, within fruA at 2943.352 kb on - strand, within fruA at 2943.462 kb on + strand, within fruA at 2943.498 kb on - strand, within fruA at 2943.511 kb on + strand, within fruA at 2943.511 kb on + strand, within fruA at 2943.511 kb on + strand, within fruA at 2943.511 kb on + strand, within fruA at 2943.511 kb on + strand, within fruA at 2943.512 kb on - strand, within fruA at 2943.512 kb on - strand, within fruA at 2943.512 kb on - strand, within fruA at 2943.512 kb on - strand, within fruA at 2943.667 kb on + strand, within fruA at 2943.667 kb on + strand, within fruA at 2943.669 kb on + strand, within fruA at 2943.669 kb on + strand, within fruA at 2943.670 kb on - strand, within fruA at 2943.766 kb on - strand, within fruA at 2943.787 kb on + strand, within fruA
Per-strain Table
Position Strand Gene LocusTag Fraction Bas37 remove 2,940,891 + fruB NOLOHH_15010 0.15 +0.0 2,940,953 + fruB NOLOHH_15010 0.21 -0.6 2,941,000 + fruB NOLOHH_15010 0.25 -1.0 2,941,465 - fruB NOLOHH_15010 0.66 +1.4 2,941,644 + fruB NOLOHH_15010 0.82 -0.3 2,941,659 + fruB NOLOHH_15010 0.83 +0.5 2,941,659 + fruB NOLOHH_15010 0.83 -0.5 2,941,746 + -0.6 2,941,868 + -0.5 2,941,868 + -1.3 2,941,868 + -0.7 2,941,868 + +0.5 2,941,868 + -1.4 2,941,890 + -0.7 2,941,890 + +0.2 2,941,890 + -1.5 2,941,993 + fruB NOLOHH_15015 0.15 -0.0 2,941,996 + fruB NOLOHH_15015 0.15 -0.7 2,942,107 + fruB NOLOHH_15015 0.27 -1.1 2,942,107 + fruB NOLOHH_15015 0.27 +0.1 2,942,351 + fruB NOLOHH_15015 0.53 -0.7 2,942,593 + fruB NOLOHH_15015 0.79 -0.4 2,942,618 + fruB NOLOHH_15015 0.82 -0.2 2,942,726 + +1.7 2,942,773 + +1.0 2,942,773 + -0.0 2,942,783 + +0.7 2,942,854 + -0.1 2,942,854 + +0.6 2,942,854 + -1.1 2,942,854 + +0.3 2,942,855 - -0.2 2,942,855 - -1.1 2,942,855 - -0.2 2,942,856 + -0.6 2,943,003 + fruA NOLOHH_15020 0.12 -0.2 2,943,067 + fruA NOLOHH_15020 0.15 +0.9 2,943,122 + fruA NOLOHH_15020 0.19 +0.3 2,943,122 + fruA NOLOHH_15020 0.19 -0.4 2,943,346 + fruA NOLOHH_15020 0.32 -0.1 2,943,346 + fruA NOLOHH_15020 0.32 +0.1 2,943,346 + fruA NOLOHH_15020 0.32 +0.1 2,943,346 + fruA NOLOHH_15020 0.32 +0.4 2,943,346 + fruA NOLOHH_15020 0.32 -0.2 2,943,351 + fruA NOLOHH_15020 0.32 -0.8 2,943,352 - fruA NOLOHH_15020 0.32 -0.9 2,943,462 + fruA NOLOHH_15020 0.39 +0.2 2,943,498 - fruA NOLOHH_15020 0.41 -2.1 2,943,511 + fruA NOLOHH_15020 0.42 -0.1 2,943,511 + fruA NOLOHH_15020 0.42 +0.3 2,943,511 + fruA NOLOHH_15020 0.42 -2.1 2,943,511 + fruA NOLOHH_15020 0.42 -1.2 2,943,511 + fruA NOLOHH_15020 0.42 +0.4 2,943,512 - fruA NOLOHH_15020 0.42 +2.1 2,943,512 - fruA NOLOHH_15020 0.42 +0.2 2,943,512 - fruA NOLOHH_15020 0.42 +0.6 2,943,512 - fruA NOLOHH_15020 0.42 -0.8 2,943,667 + fruA NOLOHH_15020 0.51 +0.7 2,943,667 + fruA NOLOHH_15020 0.51 +0.1 2,943,669 + fruA NOLOHH_15020 0.51 +0.4 2,943,669 + fruA NOLOHH_15020 0.51 +0.2 2,943,670 - fruA NOLOHH_15020 0.51 +0.2 2,943,766 - fruA NOLOHH_15020 0.57 +1.2 2,943,787 + fruA NOLOHH_15020 0.58 -0.1
Or see this region's nucleotide sequence